Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29482 | 88669;88670;88671 | chr2:178555015;178555014;178555013 | chr2:179419742;179419741;179419740 |
N2AB | 27841 | 83746;83747;83748 | chr2:178555015;178555014;178555013 | chr2:179419742;179419741;179419740 |
N2A | 26914 | 80965;80966;80967 | chr2:178555015;178555014;178555013 | chr2:179419742;179419741;179419740 |
N2B | 20417 | 61474;61475;61476 | chr2:178555015;178555014;178555013 | chr2:179419742;179419741;179419740 |
Novex-1 | 20542 | 61849;61850;61851 | chr2:178555015;178555014;178555013 | chr2:179419742;179419741;179419740 |
Novex-2 | 20609 | 62050;62051;62052 | chr2:178555015;178555014;178555013 | chr2:179419742;179419741;179419740 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs1489773324 | None | 0.01 | N | 0.199 | 0.141 | 0.170165803431 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/K | rs1489773324 | None | 0.01 | N | 0.199 | 0.141 | 0.170165803431 | gnomAD-4.0.0 | 6.57237E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4699E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1916 | likely_benign | 0.1757 | benign | -0.048 | Destabilizing | 0.495 | N | 0.306 | neutral | None | None | None | None | N |
Q/C | 0.5411 | ambiguous | 0.498 | ambiguous | 0.003 | Stabilizing | 0.995 | D | 0.296 | neutral | None | None | None | None | N |
Q/D | 0.3009 | likely_benign | 0.2652 | benign | -0.063 | Destabilizing | 0.329 | N | 0.272 | neutral | None | None | None | None | N |
Q/E | 0.0806 | likely_benign | 0.0752 | benign | -0.109 | Destabilizing | 0.001 | N | 0.158 | neutral | N | 0.437242364 | None | None | N |
Q/F | 0.5895 | likely_pathogenic | 0.5403 | ambiguous | -0.409 | Destabilizing | 0.893 | D | 0.332 | neutral | None | None | None | None | N |
Q/G | 0.2533 | likely_benign | 0.2251 | benign | -0.178 | Destabilizing | 0.665 | D | 0.375 | neutral | None | None | None | None | N |
Q/H | 0.174 | likely_benign | 0.1623 | benign | -0.006 | Destabilizing | 0.927 | D | 0.325 | neutral | N | 0.490176235 | None | None | N |
Q/I | 0.2822 | likely_benign | 0.259 | benign | 0.197 | Stabilizing | 0.543 | D | 0.417 | neutral | None | None | None | None | N |
Q/K | 0.0827 | likely_benign | 0.0765 | benign | 0.041 | Stabilizing | 0.01 | N | 0.199 | neutral | N | 0.429641601 | None | None | N |
Q/L | 0.1086 | likely_benign | 0.1021 | benign | 0.197 | Stabilizing | 0.002 | N | 0.203 | neutral | N | 0.499947048 | None | None | N |
Q/M | 0.3069 | likely_benign | 0.2833 | benign | 0.181 | Stabilizing | 0.893 | D | 0.319 | neutral | None | None | None | None | N |
Q/N | 0.2525 | likely_benign | 0.2323 | benign | -0.23 | Destabilizing | 0.704 | D | 0.285 | neutral | None | None | None | None | N |
Q/P | 0.0959 | likely_benign | 0.0902 | benign | 0.141 | Stabilizing | 0.784 | D | 0.417 | neutral | N | 0.466103833 | None | None | N |
Q/R | 0.0997 | likely_benign | 0.0923 | benign | 0.216 | Stabilizing | 0.27 | N | 0.29 | neutral | N | 0.464716967 | None | None | N |
Q/S | 0.2213 | likely_benign | 0.2094 | benign | -0.195 | Destabilizing | 0.329 | N | 0.247 | neutral | None | None | None | None | N |
Q/T | 0.1769 | likely_benign | 0.1643 | benign | -0.11 | Destabilizing | 0.031 | N | 0.203 | neutral | None | None | None | None | N |
Q/V | 0.178 | likely_benign | 0.1673 | benign | 0.141 | Stabilizing | 0.329 | N | 0.351 | neutral | None | None | None | None | N |
Q/W | 0.4845 | ambiguous | 0.4141 | ambiguous | -0.481 | Destabilizing | 0.995 | D | 0.313 | neutral | None | None | None | None | N |
Q/Y | 0.4016 | ambiguous | 0.3574 | ambiguous | -0.184 | Destabilizing | 0.944 | D | 0.353 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.