Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29485 | 88678;88679;88680 | chr2:178555006;178555005;178555004 | chr2:179419733;179419732;179419731 |
N2AB | 27844 | 83755;83756;83757 | chr2:178555006;178555005;178555004 | chr2:179419733;179419732;179419731 |
N2A | 26917 | 80974;80975;80976 | chr2:178555006;178555005;178555004 | chr2:179419733;179419732;179419731 |
N2B | 20420 | 61483;61484;61485 | chr2:178555006;178555005;178555004 | chr2:179419733;179419732;179419731 |
Novex-1 | 20545 | 61858;61859;61860 | chr2:178555006;178555005;178555004 | chr2:179419733;179419732;179419731 |
Novex-2 | 20612 | 62059;62060;62061 | chr2:178555006;178555005;178555004 | chr2:179419733;179419732;179419731 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.211 | N | 0.224 | 0.157 | 0.275215494804 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5684 | likely_pathogenic | 0.5139 | ambiguous | -0.769 | Destabilizing | 0.999 | D | 0.324 | neutral | None | None | None | None | N |
A/D | 0.3423 | ambiguous | 0.2713 | benign | -0.672 | Destabilizing | 0.976 | D | 0.463 | neutral | None | None | None | None | N |
A/E | 0.3509 | ambiguous | 0.2812 | benign | -0.824 | Destabilizing | 0.968 | D | 0.344 | neutral | N | 0.368914776 | None | None | N |
A/F | 0.4535 | ambiguous | 0.3751 | ambiguous | -0.874 | Destabilizing | 0.988 | D | 0.502 | neutral | None | None | None | None | N |
A/G | 0.1587 | likely_benign | 0.1412 | benign | -0.23 | Destabilizing | 0.811 | D | 0.305 | neutral | N | 0.400005687 | None | None | N |
A/H | 0.511 | ambiguous | 0.4481 | ambiguous | -0.226 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
A/I | 0.3117 | likely_benign | 0.257 | benign | -0.335 | Destabilizing | 0.851 | D | 0.342 | neutral | None | None | None | None | N |
A/K | 0.5182 | ambiguous | 0.4371 | ambiguous | -0.646 | Destabilizing | 0.976 | D | 0.33 | neutral | None | None | None | None | N |
A/L | 0.22 | likely_benign | 0.191 | benign | -0.335 | Destabilizing | 0.851 | D | 0.323 | neutral | None | None | None | None | N |
A/M | 0.2832 | likely_benign | 0.2428 | benign | -0.492 | Destabilizing | 0.997 | D | 0.354 | neutral | None | None | None | None | N |
A/N | 0.2674 | likely_benign | 0.242 | benign | -0.309 | Destabilizing | 0.976 | D | 0.503 | neutral | None | None | None | None | N |
A/P | 0.1844 | likely_benign | 0.1508 | benign | -0.263 | Destabilizing | 0.984 | D | 0.349 | neutral | N | 0.423037263 | None | None | N |
A/Q | 0.398 | ambiguous | 0.3466 | ambiguous | -0.59 | Destabilizing | 0.988 | D | 0.333 | neutral | None | None | None | None | N |
A/R | 0.4696 | ambiguous | 0.3978 | ambiguous | -0.16 | Destabilizing | 0.976 | D | 0.339 | neutral | None | None | None | None | N |
A/S | 0.0959 | likely_benign | 0.0943 | benign | -0.464 | Destabilizing | 0.103 | N | 0.231 | neutral | N | 0.430155236 | None | None | N |
A/T | 0.1035 | likely_benign | 0.0938 | benign | -0.544 | Destabilizing | 0.103 | N | 0.252 | neutral | N | 0.45047458 | None | None | N |
A/V | 0.1628 | likely_benign | 0.1366 | benign | -0.263 | Destabilizing | 0.211 | N | 0.224 | neutral | N | 0.443799324 | None | None | N |
A/W | 0.8206 | likely_pathogenic | 0.7548 | pathogenic | -1.003 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
A/Y | 0.5338 | ambiguous | 0.4647 | ambiguous | -0.672 | Destabilizing | 0.996 | D | 0.5 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.