Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29491 | 88696;88697;88698 | chr2:178554988;178554987;178554986 | chr2:179419715;179419714;179419713 |
N2AB | 27850 | 83773;83774;83775 | chr2:178554988;178554987;178554986 | chr2:179419715;179419714;179419713 |
N2A | 26923 | 80992;80993;80994 | chr2:178554988;178554987;178554986 | chr2:179419715;179419714;179419713 |
N2B | 20426 | 61501;61502;61503 | chr2:178554988;178554987;178554986 | chr2:179419715;179419714;179419713 |
Novex-1 | 20551 | 61876;61877;61878 | chr2:178554988;178554987;178554986 | chr2:179419715;179419714;179419713 |
Novex-2 | 20618 | 62077;62078;62079 | chr2:178554988;178554987;178554986 | chr2:179419715;179419714;179419713 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.801 | N | 0.403 | 0.189 | 0.187945064343 | gnomAD-4.0.0 | 6.84259E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4654 | ambiguous | 0.4548 | ambiguous | -0.648 | Destabilizing | 0.525 | D | 0.539 | neutral | None | None | None | None | N |
N/C | 0.4659 | ambiguous | 0.4911 | ambiguous | 0.223 | Stabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
N/D | 0.2259 | likely_benign | 0.2076 | benign | 0.149 | Stabilizing | 0.801 | D | 0.384 | neutral | D | 0.527517651 | None | None | N |
N/E | 0.5781 | likely_pathogenic | 0.5261 | ambiguous | 0.192 | Stabilizing | 0.842 | D | 0.373 | neutral | None | None | None | None | N |
N/F | 0.7586 | likely_pathogenic | 0.733 | pathogenic | -0.672 | Destabilizing | 0.974 | D | 0.599 | neutral | None | None | None | None | N |
N/G | 0.547 | ambiguous | 0.5373 | ambiguous | -0.927 | Destabilizing | 0.525 | D | 0.404 | neutral | None | None | None | None | N |
N/H | 0.1965 | likely_benign | 0.1936 | benign | -0.779 | Destabilizing | 0.012 | N | 0.226 | neutral | N | 0.504699507 | None | None | N |
N/I | 0.3765 | ambiguous | 0.3497 | ambiguous | 0.028 | Stabilizing | 0.934 | D | 0.591 | neutral | N | 0.495518606 | None | None | N |
N/K | 0.5225 | ambiguous | 0.4576 | ambiguous | 0.042 | Stabilizing | 0.801 | D | 0.403 | neutral | N | 0.518492736 | None | None | N |
N/L | 0.4784 | ambiguous | 0.4502 | ambiguous | 0.028 | Stabilizing | 0.842 | D | 0.532 | neutral | None | None | None | None | N |
N/M | 0.4471 | ambiguous | 0.4256 | ambiguous | 0.394 | Stabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | N |
N/P | 0.8226 | likely_pathogenic | 0.8186 | pathogenic | -0.168 | Destabilizing | 0.974 | D | 0.571 | neutral | None | None | None | None | N |
N/Q | 0.5227 | ambiguous | 0.4987 | ambiguous | -0.455 | Destabilizing | 0.974 | D | 0.511 | neutral | None | None | None | None | N |
N/R | 0.6175 | likely_pathogenic | 0.5716 | pathogenic | 0.002 | Stabilizing | 0.842 | D | 0.492 | neutral | None | None | None | None | N |
N/S | 0.1503 | likely_benign | 0.1594 | benign | -0.449 | Destabilizing | 0.051 | N | 0.225 | neutral | N | 0.493154362 | None | None | N |
N/T | 0.1867 | likely_benign | 0.1834 | benign | -0.217 | Destabilizing | 0.051 | N | 0.239 | neutral | N | 0.460639298 | None | None | N |
N/V | 0.4071 | ambiguous | 0.3852 | ambiguous | -0.168 | Destabilizing | 0.842 | D | 0.565 | neutral | None | None | None | None | N |
N/W | 0.8811 | likely_pathogenic | 0.8666 | pathogenic | -0.499 | Destabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | N |
N/Y | 0.2288 | likely_benign | 0.2151 | benign | -0.274 | Destabilizing | 0.934 | D | 0.575 | neutral | N | 0.487756698 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.