Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29492 | 88699;88700;88701 | chr2:178554985;178554984;178554983 | chr2:179419712;179419711;179419710 |
N2AB | 27851 | 83776;83777;83778 | chr2:178554985;178554984;178554983 | chr2:179419712;179419711;179419710 |
N2A | 26924 | 80995;80996;80997 | chr2:178554985;178554984;178554983 | chr2:179419712;179419711;179419710 |
N2B | 20427 | 61504;61505;61506 | chr2:178554985;178554984;178554983 | chr2:179419712;179419711;179419710 |
Novex-1 | 20552 | 61879;61880;61881 | chr2:178554985;178554984;178554983 | chr2:179419712;179419711;179419710 |
Novex-2 | 20619 | 62080;62081;62082 | chr2:178554985;178554984;178554983 | chr2:179419712;179419711;179419710 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.055 | N | 0.351 | 0.108 | 0.318828661733 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
T/S | rs1700819240 | None | 0.001 | N | 0.168 | 0.106 | 0.264547087235 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs1700819240 | None | 0.001 | N | 0.168 | 0.106 | 0.264547087235 | gnomAD-4.0.0 | 6.57341E-06 | None | None | None | None | N | None | 2.41313E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1054 | likely_benign | 0.0982 | benign | -0.392 | Destabilizing | 0.055 | N | 0.351 | neutral | N | 0.497792177 | None | None | N |
T/C | 0.456 | ambiguous | 0.426 | ambiguous | -0.192 | Destabilizing | 0.909 | D | 0.48 | neutral | None | None | None | None | N |
T/D | 0.3094 | likely_benign | 0.277 | benign | 0.28 | Stabilizing | 0.157 | N | 0.349 | neutral | None | None | None | None | N |
T/E | 0.3452 | ambiguous | 0.3183 | benign | 0.215 | Stabilizing | 0.157 | N | 0.365 | neutral | None | None | None | None | N |
T/F | 0.438 | ambiguous | 0.3925 | ambiguous | -0.85 | Destabilizing | 0.726 | D | 0.563 | neutral | None | None | None | None | N |
T/G | 0.1789 | likely_benign | 0.178 | benign | -0.541 | Destabilizing | 0.157 | N | 0.413 | neutral | None | None | None | None | N |
T/H | 0.2952 | likely_benign | 0.2864 | benign | -0.833 | Destabilizing | 0.909 | D | 0.577 | neutral | None | None | None | None | N |
T/I | 0.3817 | ambiguous | 0.3332 | benign | -0.116 | Destabilizing | 0.497 | N | 0.418 | neutral | D | 0.530173955 | None | None | N |
T/K | 0.224 | likely_benign | 0.2059 | benign | -0.307 | Destabilizing | 0.005 | N | 0.243 | neutral | None | None | None | None | N |
T/L | 0.2026 | likely_benign | 0.1879 | benign | -0.116 | Destabilizing | 0.272 | N | 0.369 | neutral | None | None | None | None | N |
T/M | 0.1434 | likely_benign | 0.1378 | benign | 0.074 | Stabilizing | 0.968 | D | 0.453 | neutral | None | None | None | None | N |
T/N | 0.1154 | likely_benign | 0.1083 | benign | -0.111 | Destabilizing | 0.124 | N | 0.316 | neutral | N | 0.510027969 | None | None | N |
T/P | 0.424 | ambiguous | 0.4106 | ambiguous | -0.179 | Destabilizing | 0.497 | N | 0.414 | neutral | D | 0.536099849 | None | None | N |
T/Q | 0.2531 | likely_benign | 0.2463 | benign | -0.314 | Destabilizing | 0.567 | D | 0.415 | neutral | None | None | None | None | N |
T/R | 0.2042 | likely_benign | 0.1896 | benign | -0.061 | Destabilizing | 0.396 | N | 0.363 | neutral | None | None | None | None | N |
T/S | 0.0876 | likely_benign | 0.0842 | benign | -0.346 | Destabilizing | 0.001 | N | 0.168 | neutral | N | 0.468373347 | None | None | N |
T/V | 0.2716 | likely_benign | 0.2406 | benign | -0.179 | Destabilizing | 0.272 | N | 0.332 | neutral | None | None | None | None | N |
T/W | 0.7268 | likely_pathogenic | 0.7109 | pathogenic | -0.854 | Destabilizing | 0.968 | D | 0.619 | neutral | None | None | None | None | N |
T/Y | 0.3937 | ambiguous | 0.3621 | ambiguous | -0.566 | Destabilizing | 0.726 | D | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.