Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29493 | 88702;88703;88704 | chr2:178554982;178554981;178554980 | chr2:179419709;179419708;179419707 |
N2AB | 27852 | 83779;83780;83781 | chr2:178554982;178554981;178554980 | chr2:179419709;179419708;179419707 |
N2A | 26925 | 80998;80999;81000 | chr2:178554982;178554981;178554980 | chr2:179419709;179419708;179419707 |
N2B | 20428 | 61507;61508;61509 | chr2:178554982;178554981;178554980 | chr2:179419709;179419708;179419707 |
Novex-1 | 20553 | 61882;61883;61884 | chr2:178554982;178554981;178554980 | chr2:179419709;179419708;179419707 |
Novex-2 | 20620 | 62083;62084;62085 | chr2:178554982;178554981;178554980 | chr2:179419709;179419708;179419707 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/M | rs955762474 | 0.091 | 1.0 | N | 0.455 | 0.287 | 0.299086750705 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 1.66003E-04 |
T/M | rs955762474 | 0.091 | 1.0 | N | 0.455 | 0.287 | 0.299086750705 | gnomAD-4.0.0 | 2.12127E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 3.46861E-04 | 2.15876E-05 | 1.15939E-05 | 6.62712E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0642 | likely_benign | 0.0633 | benign | -0.226 | Destabilizing | 0.994 | D | 0.337 | neutral | N | 0.377054257 | None | None | N |
T/C | 0.4071 | ambiguous | 0.3931 | ambiguous | -0.165 | Destabilizing | 1.0 | D | 0.477 | neutral | None | None | None | None | N |
T/D | 0.274 | likely_benign | 0.2427 | benign | 0.106 | Stabilizing | 1.0 | D | 0.466 | neutral | None | None | None | None | N |
T/E | 0.2286 | likely_benign | 0.2114 | benign | 0.018 | Stabilizing | 1.0 | D | 0.465 | neutral | None | None | None | None | N |
T/F | 0.2866 | likely_benign | 0.2557 | benign | -0.804 | Destabilizing | 0.269 | N | 0.289 | neutral | None | None | None | None | N |
T/G | 0.1822 | likely_benign | 0.1779 | benign | -0.327 | Destabilizing | 1.0 | D | 0.449 | neutral | None | None | None | None | N |
T/H | 0.2571 | likely_benign | 0.2458 | benign | -0.614 | Destabilizing | 1.0 | D | 0.529 | neutral | None | None | None | None | N |
T/I | 0.1671 | likely_benign | 0.1478 | benign | -0.083 | Destabilizing | 0.998 | D | 0.429 | neutral | None | None | None | None | N |
T/K | 0.1669 | likely_benign | 0.1596 | benign | -0.261 | Destabilizing | 1.0 | D | 0.463 | neutral | N | 0.364586392 | None | None | N |
T/L | 0.1074 | likely_benign | 0.1022 | benign | -0.083 | Destabilizing | 0.983 | D | 0.413 | neutral | None | None | None | None | N |
T/M | 0.0942 | likely_benign | 0.0922 | benign | 0.053 | Stabilizing | 1.0 | D | 0.455 | neutral | N | 0.452706809 | None | None | N |
T/N | 0.1174 | likely_benign | 0.1139 | benign | -0.003 | Destabilizing | 1.0 | D | 0.419 | neutral | None | None | None | None | N |
T/P | 0.0801 | likely_benign | 0.0833 | benign | -0.103 | Destabilizing | 0.999 | D | 0.439 | neutral | N | 0.376880899 | None | None | N |
T/Q | 0.1996 | likely_benign | 0.2011 | benign | -0.242 | Destabilizing | 1.0 | D | 0.455 | neutral | None | None | None | None | N |
T/R | 0.139 | likely_benign | 0.1353 | benign | 0.01 | Stabilizing | 1.0 | D | 0.441 | neutral | N | 0.403624783 | None | None | N |
T/S | 0.0956 | likely_benign | 0.0966 | benign | -0.182 | Destabilizing | 0.998 | D | 0.363 | neutral | N | 0.379342414 | None | None | N |
T/V | 0.1231 | likely_benign | 0.1139 | benign | -0.103 | Destabilizing | 0.992 | D | 0.347 | neutral | None | None | None | None | N |
T/W | 0.5688 | likely_pathogenic | 0.5497 | ambiguous | -0.851 | Destabilizing | 1.0 | D | 0.551 | neutral | None | None | None | None | N |
T/Y | 0.2979 | likely_benign | 0.2793 | benign | -0.543 | Destabilizing | 0.995 | D | 0.527 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.