Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29494 | 88705;88706;88707 | chr2:178554979;178554978;178554977 | chr2:179419706;179419705;179419704 |
N2AB | 27853 | 83782;83783;83784 | chr2:178554979;178554978;178554977 | chr2:179419706;179419705;179419704 |
N2A | 26926 | 81001;81002;81003 | chr2:178554979;178554978;178554977 | chr2:179419706;179419705;179419704 |
N2B | 20429 | 61510;61511;61512 | chr2:178554979;178554978;178554977 | chr2:179419706;179419705;179419704 |
Novex-1 | 20554 | 61885;61886;61887 | chr2:178554979;178554978;178554977 | chr2:179419706;179419705;179419704 |
Novex-2 | 20621 | 62086;62087;62088 | chr2:178554979;178554978;178554977 | chr2:179419706;179419705;179419704 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.003 | N | 0.173 | 0.141 | 0.241664281697 | gnomAD-4.0.0 | 6.84269E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15939E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1925 | likely_benign | 0.1844 | benign | -0.266 | Destabilizing | 0.565 | D | 0.55 | neutral | N | 0.517511302 | None | None | N |
D/C | 0.623 | likely_pathogenic | 0.6061 | pathogenic | 0.096 | Stabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | N |
D/E | 0.1436 | likely_benign | 0.1507 | benign | -0.202 | Destabilizing | 0.003 | N | 0.173 | neutral | N | 0.45886843 | None | None | N |
D/F | 0.6243 | likely_pathogenic | 0.5935 | pathogenic | -0.267 | Destabilizing | 0.987 | D | 0.651 | neutral | None | None | None | None | N |
D/G | 0.1741 | likely_benign | 0.1663 | benign | -0.419 | Destabilizing | 0.722 | D | 0.492 | neutral | N | 0.478723627 | None | None | N |
D/H | 0.2805 | likely_benign | 0.2663 | benign | 0.004 | Stabilizing | 0.949 | D | 0.567 | neutral | N | 0.484935996 | None | None | N |
D/I | 0.4108 | ambiguous | 0.3916 | ambiguous | 0.084 | Stabilizing | 0.961 | D | 0.652 | neutral | None | None | None | None | N |
D/K | 0.3903 | ambiguous | 0.3885 | ambiguous | 0.512 | Stabilizing | 0.633 | D | 0.49 | neutral | None | None | None | None | N |
D/L | 0.4105 | ambiguous | 0.3865 | ambiguous | 0.084 | Stabilizing | 0.923 | D | 0.599 | neutral | None | None | None | None | N |
D/M | 0.6088 | likely_pathogenic | 0.5884 | pathogenic | 0.193 | Stabilizing | 0.996 | D | 0.651 | neutral | None | None | None | None | N |
D/N | 0.1119 | likely_benign | 0.1024 | benign | 0.179 | Stabilizing | 0.722 | D | 0.495 | neutral | N | 0.433991415 | None | None | N |
D/P | 0.7839 | likely_pathogenic | 0.7952 | pathogenic | -0.013 | Destabilizing | 0.961 | D | 0.541 | neutral | None | None | None | None | N |
D/Q | 0.3151 | likely_benign | 0.3156 | benign | 0.203 | Stabilizing | 0.237 | N | 0.173 | neutral | None | None | None | None | N |
D/R | 0.4251 | ambiguous | 0.4223 | ambiguous | 0.611 | Stabilizing | 0.923 | D | 0.582 | neutral | None | None | None | None | N |
D/S | 0.1311 | likely_benign | 0.124 | benign | 0.11 | Stabilizing | 0.633 | D | 0.416 | neutral | None | None | None | None | N |
D/T | 0.2186 | likely_benign | 0.2038 | benign | 0.237 | Stabilizing | 0.775 | D | 0.544 | neutral | None | None | None | None | N |
D/V | 0.2426 | likely_benign | 0.2335 | benign | -0.013 | Destabilizing | 0.901 | D | 0.599 | neutral | N | 0.484429017 | None | None | N |
D/W | 0.8662 | likely_pathogenic | 0.8589 | pathogenic | -0.151 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | N |
D/Y | 0.2454 | likely_benign | 0.2291 | benign | -0.032 | Destabilizing | 0.983 | D | 0.651 | neutral | N | 0.497773535 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.