Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29506 | 88741;88742;88743 | chr2:178554943;178554942;178554941 | chr2:179419670;179419669;179419668 |
N2AB | 27865 | 83818;83819;83820 | chr2:178554943;178554942;178554941 | chr2:179419670;179419669;179419668 |
N2A | 26938 | 81037;81038;81039 | chr2:178554943;178554942;178554941 | chr2:179419670;179419669;179419668 |
N2B | 20441 | 61546;61547;61548 | chr2:178554943;178554942;178554941 | chr2:179419670;179419669;179419668 |
Novex-1 | 20566 | 61921;61922;61923 | chr2:178554943;178554942;178554941 | chr2:179419670;179419669;179419668 |
Novex-2 | 20633 | 62122;62123;62124 | chr2:178554943;178554942;178554941 | chr2:179419670;179419669;179419668 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.982 | N | 0.545 | 0.142 | 0.329020015101 | gnomAD-4.0.0 | 1.36844E-06 | None | None | None | None | N | None | 0 | 2.23614E-05 | None | 0 | 0 | None | 0 | 0 | 8.99437E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0926 | likely_benign | 0.0994 | benign | -0.365 | Destabilizing | 0.953 | D | 0.491 | neutral | None | None | None | None | N |
L/C | 0.2319 | likely_benign | 0.2448 | benign | -0.548 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
L/D | 0.2447 | likely_benign | 0.2613 | benign | -0.064 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/E | 0.1387 | likely_benign | 0.1453 | benign | -0.172 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/F | 0.0865 | likely_benign | 0.0966 | benign | -0.568 | Destabilizing | 0.982 | D | 0.545 | neutral | N | 0.475794312 | None | None | N |
L/G | 0.1938 | likely_benign | 0.2034 | benign | -0.479 | Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
L/H | 0.0863 | likely_benign | 0.0931 | benign | 0.117 | Stabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.43208082 | None | None | N |
L/I | 0.0675 | likely_benign | 0.0706 | benign | -0.199 | Destabilizing | 0.046 | N | 0.21 | neutral | N | 0.427579078 | None | None | N |
L/K | 0.0852 | likely_benign | 0.0899 | benign | -0.142 | Destabilizing | 0.993 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/M | 0.0792 | likely_benign | 0.0832 | benign | -0.291 | Destabilizing | 0.986 | D | 0.558 | neutral | None | None | None | None | N |
L/N | 0.1153 | likely_benign | 0.1245 | benign | 0.06 | Stabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/P | 0.1964 | likely_benign | 0.219 | benign | -0.223 | Destabilizing | 0.997 | D | 0.715 | prob.delet. | N | 0.456861835 | None | None | N |
L/Q | 0.0605 | likely_benign | 0.0641 | benign | -0.16 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
L/R | 0.0727 | likely_benign | 0.0749 | benign | 0.356 | Stabilizing | 0.991 | D | 0.684 | prob.neutral | N | 0.418727521 | None | None | N |
L/S | 0.0902 | likely_benign | 0.1005 | benign | -0.351 | Destabilizing | 0.973 | D | 0.539 | neutral | None | None | None | None | N |
L/T | 0.0958 | likely_benign | 0.1059 | benign | -0.354 | Destabilizing | 0.386 | N | 0.28 | neutral | None | None | None | None | N |
L/V | 0.0674 | likely_benign | 0.0712 | benign | -0.223 | Destabilizing | 0.76 | D | 0.498 | neutral | N | 0.432254179 | None | None | N |
L/W | 0.1295 | likely_benign | 0.1418 | benign | -0.597 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
L/Y | 0.1607 | likely_benign | 0.1788 | benign | -0.325 | Destabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.