Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29510 | 88753;88754;88755 | chr2:178554931;178554930;178554929 | chr2:179419658;179419657;179419656 |
N2AB | 27869 | 83830;83831;83832 | chr2:178554931;178554930;178554929 | chr2:179419658;179419657;179419656 |
N2A | 26942 | 81049;81050;81051 | chr2:178554931;178554930;178554929 | chr2:179419658;179419657;179419656 |
N2B | 20445 | 61558;61559;61560 | chr2:178554931;178554930;178554929 | chr2:179419658;179419657;179419656 |
Novex-1 | 20570 | 61933;61934;61935 | chr2:178554931;178554930;178554929 | chr2:179419658;179419657;179419656 |
Novex-2 | 20637 | 62134;62135;62136 | chr2:178554931;178554930;178554929 | chr2:179419658;179419657;179419656 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/W | rs1396298450 | -0.995 | 0.258 | D | 0.533 | 0.127 | 0.627302349016 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.1372 | likely_benign | 0.1255 | benign | -1.656 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
C/D | 0.1941 | likely_benign | 0.1692 | benign | -0.503 | Destabilizing | 0.001 | N | 0.437 | neutral | None | None | None | None | N |
C/E | 0.2923 | likely_benign | 0.247 | benign | -0.416 | Destabilizing | 0.001 | N | 0.431 | neutral | None | None | None | None | N |
C/F | 0.0846 | likely_benign | 0.0837 | benign | -1.164 | Destabilizing | 0.013 | N | 0.415 | neutral | N | 0.48472688 | None | None | N |
C/G | 0.0965 | likely_benign | 0.0893 | benign | -1.945 | Destabilizing | None | N | 0.403 | neutral | N | 0.521378326 | None | None | N |
C/H | 0.0975 | likely_benign | 0.0819 | benign | -2.059 | Highly Destabilizing | None | N | 0.352 | neutral | None | None | None | None | N |
C/I | 0.1308 | likely_benign | 0.1181 | benign | -0.921 | Destabilizing | 0.001 | N | 0.345 | neutral | None | None | None | None | N |
C/K | 0.1896 | likely_benign | 0.1472 | benign | -0.91 | Destabilizing | 0.001 | N | 0.447 | neutral | None | None | None | None | N |
C/L | 0.1483 | likely_benign | 0.1301 | benign | -0.921 | Destabilizing | None | N | 0.277 | neutral | None | None | None | None | N |
C/M | 0.247 | likely_benign | 0.2247 | benign | -0.086 | Destabilizing | 0.041 | N | 0.509 | neutral | None | None | None | None | N |
C/N | 0.0964 | likely_benign | 0.0839 | benign | -0.852 | Destabilizing | None | N | 0.351 | neutral | None | None | None | None | N |
C/P | 0.4821 | ambiguous | 0.427 | ambiguous | -1.14 | Destabilizing | 0.004 | N | 0.421 | neutral | None | None | None | None | N |
C/Q | 0.1614 | likely_benign | 0.1323 | benign | -0.826 | Destabilizing | 0.004 | N | 0.417 | neutral | None | None | None | None | N |
C/R | 0.0894 | likely_benign | 0.0714 | benign | -0.783 | Destabilizing | 0.003 | N | 0.404 | neutral | N | 0.447515286 | None | None | N |
C/S | 0.0793 | likely_benign | 0.075 | benign | -1.366 | Destabilizing | None | N | 0.223 | neutral | N | 0.432449833 | None | None | N |
C/T | 0.1123 | likely_benign | 0.102 | benign | -1.105 | Destabilizing | None | N | 0.224 | neutral | None | None | None | None | N |
C/V | 0.1445 | likely_benign | 0.1332 | benign | -1.14 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | N |
C/W | 0.1792 | likely_benign | 0.1742 | benign | -1.165 | Destabilizing | 0.258 | N | 0.533 | neutral | D | 0.522071759 | None | None | N |
C/Y | 0.083 | likely_benign | 0.0805 | benign | -1.116 | Destabilizing | 0.007 | N | 0.389 | neutral | N | 0.492095569 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.