Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29513 | 88762;88763;88764 | chr2:178554922;178554921;178554920 | chr2:179419649;179419648;179419647 |
N2AB | 27872 | 83839;83840;83841 | chr2:178554922;178554921;178554920 | chr2:179419649;179419648;179419647 |
N2A | 26945 | 81058;81059;81060 | chr2:178554922;178554921;178554920 | chr2:179419649;179419648;179419647 |
N2B | 20448 | 61567;61568;61569 | chr2:178554922;178554921;178554920 | chr2:179419649;179419648;179419647 |
Novex-1 | 20573 | 61942;61943;61944 | chr2:178554922;178554921;178554920 | chr2:179419649;179419648;179419647 |
Novex-2 | 20640 | 62143;62144;62145 | chr2:178554922;178554921;178554920 | chr2:179419649;179419648;179419647 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1318031463 | -2.76 | 0.999 | N | 0.844 | 0.521 | 0.674404827817 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/S | rs1318031463 | -2.76 | 0.999 | N | 0.844 | 0.521 | 0.674404827817 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85785E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.956 | likely_pathogenic | 0.9441 | pathogenic | -2.545 | Highly Destabilizing | 0.997 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/C | 0.9199 | likely_pathogenic | 0.9021 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -2.964 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/E | 0.9954 | likely_pathogenic | 0.9943 | pathogenic | -2.721 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/F | 0.7371 | likely_pathogenic | 0.6867 | pathogenic | -1.519 | Destabilizing | 0.999 | D | 0.812 | deleterious | N | 0.476442942 | None | None | N |
L/G | 0.9896 | likely_pathogenic | 0.9864 | pathogenic | -3.108 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/H | 0.9935 | likely_pathogenic | 0.9913 | pathogenic | -2.628 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
L/I | 0.1309 | likely_benign | 0.1197 | benign | -0.905 | Destabilizing | 0.981 | D | 0.669 | neutral | N | 0.456939193 | None | None | N |
L/K | 0.9911 | likely_pathogenic | 0.9885 | pathogenic | -1.897 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/M | 0.2828 | likely_benign | 0.2451 | benign | -0.901 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
L/N | 0.9965 | likely_pathogenic | 0.9956 | pathogenic | -2.309 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/P | 0.9962 | likely_pathogenic | 0.9946 | pathogenic | -1.434 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/Q | 0.9846 | likely_pathogenic | 0.9789 | pathogenic | -2.136 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/R | 0.985 | likely_pathogenic | 0.9812 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/S | 0.9962 | likely_pathogenic | 0.9949 | pathogenic | -2.99 | Highly Destabilizing | 0.999 | D | 0.844 | deleterious | N | 0.477963879 | None | None | N |
L/T | 0.9783 | likely_pathogenic | 0.9728 | pathogenic | -2.598 | Highly Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
L/V | 0.1968 | likely_benign | 0.1781 | benign | -1.434 | Destabilizing | 0.767 | D | 0.412 | neutral | N | 0.440892305 | None | None | N |
L/W | 0.9694 | likely_pathogenic | 0.9563 | pathogenic | -1.96 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
L/Y | 0.9728 | likely_pathogenic | 0.9614 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.