Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29515 | 88768;88769;88770 | chr2:178554916;178554915;178554914 | chr2:179419643;179419642;179419641 |
N2AB | 27874 | 83845;83846;83847 | chr2:178554916;178554915;178554914 | chr2:179419643;179419642;179419641 |
N2A | 26947 | 81064;81065;81066 | chr2:178554916;178554915;178554914 | chr2:179419643;179419642;179419641 |
N2B | 20450 | 61573;61574;61575 | chr2:178554916;178554915;178554914 | chr2:179419643;179419642;179419641 |
Novex-1 | 20575 | 61948;61949;61950 | chr2:178554916;178554915;178554914 | chr2:179419643;179419642;179419641 |
Novex-2 | 20642 | 62149;62150;62151 | chr2:178554916;178554915;178554914 | chr2:179419643;179419642;179419641 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.998 | D | 0.839 | 0.733 | 0.788205437025 | gnomAD-4.0.0 | 3.1825E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71576E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5236 | ambiguous | 0.5127 | ambiguous | -2.192 | Highly Destabilizing | 0.97 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/C | 0.7711 | likely_pathogenic | 0.7754 | pathogenic | -1.657 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -1.807 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
L/E | 0.9926 | likely_pathogenic | 0.9919 | pathogenic | -1.721 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
L/F | 0.8399 | likely_pathogenic | 0.8249 | pathogenic | -1.446 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | N |
L/G | 0.9272 | likely_pathogenic | 0.919 | pathogenic | -2.619 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
L/H | 0.9896 | likely_pathogenic | 0.989 | pathogenic | -1.869 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/I | 0.1815 | likely_benign | 0.1884 | benign | -1.034 | Destabilizing | 0.248 | N | 0.338 | neutral | N | 0.497058672 | None | None | N |
L/K | 0.9925 | likely_pathogenic | 0.9923 | pathogenic | -1.601 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
L/M | 0.3456 | ambiguous | 0.3285 | benign | -0.936 | Destabilizing | 0.996 | D | 0.762 | deleterious | None | None | None | None | N |
L/N | 0.9911 | likely_pathogenic | 0.9907 | pathogenic | -1.559 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
L/P | 0.996 | likely_pathogenic | 0.9959 | pathogenic | -1.393 | Destabilizing | 0.998 | D | 0.839 | deleterious | D | 0.528595087 | None | None | N |
L/Q | 0.9666 | likely_pathogenic | 0.963 | pathogenic | -1.641 | Destabilizing | 0.998 | D | 0.822 | deleterious | N | 0.489428993 | None | None | N |
L/R | 0.9798 | likely_pathogenic | 0.9791 | pathogenic | -1.095 | Destabilizing | 0.998 | D | 0.829 | deleterious | D | 0.528595087 | None | None | N |
L/S | 0.9321 | likely_pathogenic | 0.9274 | pathogenic | -2.294 | Highly Destabilizing | 0.996 | D | 0.818 | deleterious | None | None | None | None | N |
L/T | 0.815 | likely_pathogenic | 0.8135 | pathogenic | -2.075 | Highly Destabilizing | 0.97 | D | 0.755 | deleterious | None | None | None | None | N |
L/V | 0.1389 | likely_benign | 0.1515 | benign | -1.393 | Destabilizing | 0.122 | N | 0.33 | neutral | N | 0.392272504 | None | None | N |
L/W | 0.9862 | likely_pathogenic | 0.9836 | pathogenic | -1.593 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/Y | 0.9807 | likely_pathogenic | 0.9783 | pathogenic | -1.368 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.