Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29519 | 88780;88781;88782 | chr2:178554904;178554903;178554902 | chr2:179419631;179419630;179419629 |
N2AB | 27878 | 83857;83858;83859 | chr2:178554904;178554903;178554902 | chr2:179419631;179419630;179419629 |
N2A | 26951 | 81076;81077;81078 | chr2:178554904;178554903;178554902 | chr2:179419631;179419630;179419629 |
N2B | 20454 | 61585;61586;61587 | chr2:178554904;178554903;178554902 | chr2:179419631;179419630;179419629 |
Novex-1 | 20579 | 61960;61961;61962 | chr2:178554904;178554903;178554902 | chr2:179419631;179419630;179419629 |
Novex-2 | 20646 | 62161;62162;62163 | chr2:178554904;178554903;178554902 | chr2:179419631;179419630;179419629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1559234546 | None | None | N | 0.248 | 0.137 | 0.40032279838 | gnomAD-4.0.0 | 6.84201E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99433E-07 | 0 | 0 |
M/T | rs1019759612 | None | 0.024 | N | 0.483 | 0.292 | 0.556224665151 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
M/T | rs1019759612 | None | 0.024 | N | 0.483 | 0.292 | 0.556224665151 | gnomAD-4.0.0 | 3.09832E-06 | None | None | None | None | I | None | 1.33426E-05 | 0 | None | 0 | 2.22926E-05 | None | 0 | 0 | 2.54269E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3697 | ambiguous | 0.3664 | ambiguous | -0.137 | Destabilizing | 0.014 | N | 0.529 | neutral | None | None | None | None | I |
M/C | 0.7115 | likely_pathogenic | 0.7037 | pathogenic | -0.205 | Destabilizing | 0.628 | D | 0.515 | neutral | None | None | None | None | I |
M/D | 0.9034 | likely_pathogenic | 0.9016 | pathogenic | 0.368 | Stabilizing | 0.628 | D | 0.554 | neutral | None | None | None | None | I |
M/E | 0.6967 | likely_pathogenic | 0.6817 | pathogenic | 0.296 | Stabilizing | 0.136 | N | 0.556 | neutral | None | None | None | None | I |
M/F | 0.3695 | ambiguous | 0.35 | ambiguous | -0.173 | Destabilizing | 0.038 | N | 0.358 | neutral | None | None | None | None | I |
M/G | 0.6624 | likely_pathogenic | 0.6642 | pathogenic | -0.224 | Destabilizing | 0.136 | N | 0.543 | neutral | None | None | None | None | I |
M/H | 0.5902 | likely_pathogenic | 0.5859 | pathogenic | 0.391 | Stabilizing | 0.628 | D | 0.567 | neutral | None | None | None | None | I |
M/I | 0.4805 | ambiguous | 0.3974 | ambiguous | -0.011 | Destabilizing | None | N | 0.248 | neutral | N | 0.44382162 | None | None | I |
M/K | 0.3373 | likely_benign | 0.3222 | benign | 0.504 | Stabilizing | 0.106 | N | 0.473 | neutral | N | 0.478704984 | None | None | I |
M/L | 0.129 | likely_benign | 0.1262 | benign | -0.011 | Destabilizing | None | N | 0.242 | neutral | N | 0.356221278 | None | None | I |
M/N | 0.6227 | likely_pathogenic | 0.6408 | pathogenic | 0.674 | Stabilizing | 0.628 | D | 0.568 | neutral | None | None | None | None | I |
M/P | 0.9248 | likely_pathogenic | 0.9035 | pathogenic | -0.029 | Destabilizing | 0.628 | D | 0.566 | neutral | None | None | None | None | I |
M/Q | 0.3777 | ambiguous | 0.3683 | ambiguous | 0.503 | Stabilizing | 0.628 | D | 0.387 | neutral | None | None | None | None | I |
M/R | 0.3255 | likely_benign | 0.2999 | benign | 0.926 | Stabilizing | 0.106 | N | 0.49 | neutral | N | 0.46793063 | None | None | I |
M/S | 0.4464 | ambiguous | 0.4657 | ambiguous | 0.287 | Stabilizing | 0.136 | N | 0.481 | neutral | None | None | None | None | I |
M/T | 0.2901 | likely_benign | 0.28 | benign | 0.301 | Stabilizing | 0.024 | N | 0.483 | neutral | N | 0.439626521 | None | None | I |
M/V | 0.102 | likely_benign | 0.0933 | benign | -0.029 | Destabilizing | 0.001 | N | 0.348 | neutral | N | 0.402935002 | None | None | I |
M/W | 0.7144 | likely_pathogenic | 0.7042 | pathogenic | -0.197 | Destabilizing | 0.864 | D | 0.526 | neutral | None | None | None | None | I |
M/Y | 0.6158 | likely_pathogenic | 0.6148 | pathogenic | 0.021 | Stabilizing | 0.356 | N | 0.489 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.