Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29523 | 88792;88793;88794 | chr2:178554892;178554891;178554890 | chr2:179419619;179419618;179419617 |
N2AB | 27882 | 83869;83870;83871 | chr2:178554892;178554891;178554890 | chr2:179419619;179419618;179419617 |
N2A | 26955 | 81088;81089;81090 | chr2:178554892;178554891;178554890 | chr2:179419619;179419618;179419617 |
N2B | 20458 | 61597;61598;61599 | chr2:178554892;178554891;178554890 | chr2:179419619;179419618;179419617 |
Novex-1 | 20583 | 61972;61973;61974 | chr2:178554892;178554891;178554890 | chr2:179419619;179419618;179419617 |
Novex-2 | 20650 | 62173;62174;62175 | chr2:178554892;178554891;178554890 | chr2:179419619;179419618;179419617 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.988 | D | 0.608 | 0.517 | 0.424194796918 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85783E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.079 | likely_benign | 0.0755 | benign | -0.324 | Destabilizing | 0.061 | N | 0.123 | neutral | N | 0.502179277 | None | None | I |
S/C | 0.1133 | likely_benign | 0.1084 | benign | -0.328 | Destabilizing | 0.046 | N | 0.219 | neutral | None | None | None | None | I |
S/D | 0.5387 | ambiguous | 0.4774 | ambiguous | 0.304 | Stabilizing | 0.969 | D | 0.475 | neutral | None | None | None | None | I |
S/E | 0.5498 | ambiguous | 0.4933 | ambiguous | 0.217 | Stabilizing | 0.969 | D | 0.462 | neutral | None | None | None | None | I |
S/F | 0.1618 | likely_benign | 0.1471 | benign | -0.879 | Destabilizing | 0.964 | D | 0.589 | neutral | None | None | None | None | I |
S/G | 0.1286 | likely_benign | 0.1224 | benign | -0.445 | Destabilizing | 0.863 | D | 0.456 | neutral | None | None | None | None | I |
S/H | 0.3076 | likely_benign | 0.2774 | benign | -0.922 | Destabilizing | 0.982 | D | 0.57 | neutral | None | None | None | None | I |
S/I | 0.1741 | likely_benign | 0.1608 | benign | -0.139 | Destabilizing | 0.969 | D | 0.581 | neutral | None | None | None | None | I |
S/K | 0.5487 | ambiguous | 0.4832 | ambiguous | -0.427 | Destabilizing | 0.969 | D | 0.428 | neutral | None | None | None | None | I |
S/L | 0.1059 | likely_benign | 0.0995 | benign | -0.139 | Destabilizing | 0.826 | D | 0.509 | neutral | N | 0.508798605 | None | None | I |
S/M | 0.1926 | likely_benign | 0.1862 | benign | -0.002 | Destabilizing | 0.997 | D | 0.568 | neutral | None | None | None | None | I |
S/N | 0.1791 | likely_benign | 0.1698 | benign | -0.179 | Destabilizing | 0.99 | D | 0.499 | neutral | None | None | None | None | I |
S/P | 0.8959 | likely_pathogenic | 0.8439 | pathogenic | -0.171 | Destabilizing | 0.988 | D | 0.608 | neutral | D | 0.527827083 | None | None | I |
S/Q | 0.4558 | ambiguous | 0.4134 | ambiguous | -0.402 | Destabilizing | 0.997 | D | 0.509 | neutral | None | None | None | None | I |
S/R | 0.4559 | ambiguous | 0.3982 | ambiguous | -0.248 | Destabilizing | 0.991 | D | 0.606 | neutral | None | None | None | None | I |
S/T | 0.0731 | likely_benign | 0.0722 | benign | -0.294 | Destabilizing | 0.826 | D | 0.43 | neutral | N | 0.448150004 | None | None | I |
S/V | 0.1542 | likely_benign | 0.1456 | benign | -0.171 | Destabilizing | 0.939 | D | 0.519 | neutral | None | None | None | None | I |
S/W | 0.3473 | ambiguous | 0.3081 | benign | -0.889 | Destabilizing | 0.998 | D | 0.56 | neutral | None | None | None | None | I |
S/Y | 0.1812 | likely_benign | 0.1646 | benign | -0.6 | Destabilizing | 0.17 | N | 0.411 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.