Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29524 | 88795;88796;88797 | chr2:178554889;178554888;178554887 | chr2:179419616;179419615;179419614 |
N2AB | 27883 | 83872;83873;83874 | chr2:178554889;178554888;178554887 | chr2:179419616;179419615;179419614 |
N2A | 26956 | 81091;81092;81093 | chr2:178554889;178554888;178554887 | chr2:179419616;179419615;179419614 |
N2B | 20459 | 61600;61601;61602 | chr2:178554889;178554888;178554887 | chr2:179419616;179419615;179419614 |
Novex-1 | 20584 | 61975;61976;61977 | chr2:178554889;178554888;178554887 | chr2:179419616;179419615;179419614 |
Novex-2 | 20651 | 62176;62177;62178 | chr2:178554889;178554888;178554887 | chr2:179419616;179419615;179419614 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1700784801 | None | 0.733 | N | 0.387 | 0.298 | 0.479893544335 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02425E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5511 | ambiguous | 0.5298 | ambiguous | -0.898 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/D | 0.7192 | likely_pathogenic | 0.6512 | pathogenic | -0.34 | Destabilizing | 0.998 | D | 0.813 | deleterious | N | 0.509258449 | None | None | N |
A/E | 0.5712 | likely_pathogenic | 0.4876 | ambiguous | -0.448 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
A/F | 0.6213 | likely_pathogenic | 0.565 | pathogenic | -0.759 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
A/G | 0.2281 | likely_benign | 0.212 | benign | -0.522 | Destabilizing | 0.217 | N | 0.397 | neutral | N | 0.496029266 | None | None | N |
A/H | 0.7368 | likely_pathogenic | 0.6759 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/I | 0.4806 | ambiguous | 0.4383 | ambiguous | -0.234 | Destabilizing | 0.995 | D | 0.742 | deleterious | None | None | None | None | N |
A/K | 0.6781 | likely_pathogenic | 0.5853 | pathogenic | -0.766 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
A/L | 0.4253 | ambiguous | 0.3852 | ambiguous | -0.234 | Destabilizing | 0.983 | D | 0.609 | neutral | None | None | None | None | N |
A/M | 0.3929 | ambiguous | 0.3596 | ambiguous | -0.39 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
A/N | 0.638 | likely_pathogenic | 0.5829 | pathogenic | -0.506 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
A/P | 0.9848 | likely_pathogenic | 0.977 | pathogenic | -0.249 | Destabilizing | 0.999 | D | 0.793 | deleterious | D | 0.528212078 | None | None | N |
A/Q | 0.5596 | ambiguous | 0.4945 | ambiguous | -0.709 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
A/R | 0.6328 | likely_pathogenic | 0.5421 | ambiguous | -0.355 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
A/S | 0.155 | likely_benign | 0.1466 | benign | -0.807 | Destabilizing | 0.989 | D | 0.584 | neutral | D | 0.535579774 | None | None | N |
A/T | 0.1252 | likely_benign | 0.1152 | benign | -0.815 | Destabilizing | 0.989 | D | 0.675 | neutral | N | 0.49374786 | None | None | N |
A/V | 0.2126 | likely_benign | 0.1946 | benign | -0.249 | Destabilizing | 0.733 | D | 0.387 | neutral | N | 0.52126647 | None | None | N |
A/W | 0.9345 | likely_pathogenic | 0.9114 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/Y | 0.7483 | likely_pathogenic | 0.7004 | pathogenic | -0.578 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.