Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29526 | 88801;88802;88803 | chr2:178554883;178554882;178554881 | chr2:179419610;179419609;179419608 |
N2AB | 27885 | 83878;83879;83880 | chr2:178554883;178554882;178554881 | chr2:179419610;179419609;179419608 |
N2A | 26958 | 81097;81098;81099 | chr2:178554883;178554882;178554881 | chr2:179419610;179419609;179419608 |
N2B | 20461 | 61606;61607;61608 | chr2:178554883;178554882;178554881 | chr2:179419610;179419609;179419608 |
Novex-1 | 20586 | 61981;61982;61983 | chr2:178554883;178554882;178554881 | chr2:179419610;179419609;179419608 |
Novex-2 | 20653 | 62182;62183;62184 | chr2:178554883;178554882;178554881 | chr2:179419610;179419609;179419608 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs887166590 | -1.085 | 0.004 | N | 0.135 | 0.075 | 0.460352466543 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
I/V | rs887166590 | -1.085 | 0.004 | N | 0.135 | 0.075 | 0.460352466543 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs887166590 | -1.085 | 0.004 | N | 0.135 | 0.075 | 0.460352466543 | gnomAD-4.0.0 | 3.71792E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08535E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8545 | likely_pathogenic | 0.8415 | pathogenic | -2.427 | Highly Destabilizing | 0.702 | D | 0.659 | neutral | None | None | None | None | N |
I/C | 0.898 | likely_pathogenic | 0.8809 | pathogenic | -1.663 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
I/D | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -2.623 | Highly Destabilizing | 0.996 | D | 0.82 | deleterious | None | None | None | None | N |
I/E | 0.9923 | likely_pathogenic | 0.9909 | pathogenic | -2.363 | Highly Destabilizing | 0.988 | D | 0.805 | deleterious | None | None | None | None | N |
I/F | 0.3412 | ambiguous | 0.2957 | benign | -1.428 | Destabilizing | 0.984 | D | 0.721 | prob.delet. | N | 0.465103756 | None | None | N |
I/G | 0.9805 | likely_pathogenic | 0.9772 | pathogenic | -3.003 | Highly Destabilizing | 0.988 | D | 0.797 | deleterious | None | None | None | None | N |
I/H | 0.9828 | likely_pathogenic | 0.978 | pathogenic | -2.443 | Highly Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
I/K | 0.9786 | likely_pathogenic | 0.9737 | pathogenic | -1.814 | Destabilizing | 0.988 | D | 0.803 | deleterious | None | None | None | None | N |
I/L | 0.2214 | likely_benign | 0.2101 | benign | -0.749 | Destabilizing | 0.437 | N | 0.359 | neutral | N | 0.425966578 | None | None | N |
I/M | 0.2361 | likely_benign | 0.2179 | benign | -0.703 | Destabilizing | 0.984 | D | 0.703 | prob.neutral | N | 0.485189485 | None | None | N |
I/N | 0.9721 | likely_pathogenic | 0.9672 | pathogenic | -2.222 | Highly Destabilizing | 0.995 | D | 0.812 | deleterious | N | 0.520554394 | None | None | N |
I/P | 0.993 | likely_pathogenic | 0.9907 | pathogenic | -1.291 | Destabilizing | 0.996 | D | 0.821 | deleterious | None | None | None | None | N |
I/Q | 0.9793 | likely_pathogenic | 0.9747 | pathogenic | -2.018 | Highly Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
I/R | 0.9649 | likely_pathogenic | 0.9565 | pathogenic | -1.678 | Destabilizing | 0.988 | D | 0.816 | deleterious | None | None | None | None | N |
I/S | 0.9451 | likely_pathogenic | 0.9376 | pathogenic | -2.944 | Highly Destabilizing | 0.984 | D | 0.771 | deleterious | N | 0.508817247 | None | None | N |
I/T | 0.9268 | likely_pathogenic | 0.9175 | pathogenic | -2.518 | Highly Destabilizing | 0.896 | D | 0.683 | prob.neutral | N | 0.471299009 | None | None | N |
I/V | 0.0999 | likely_benign | 0.0969 | benign | -1.291 | Destabilizing | 0.004 | N | 0.135 | neutral | N | 0.391392644 | None | None | N |
I/W | 0.9734 | likely_pathogenic | 0.9653 | pathogenic | -1.786 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
I/Y | 0.9 | likely_pathogenic | 0.864 | pathogenic | -1.476 | Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.