Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29533 | 88822;88823;88824 | chr2:178554750;178554749;178554748 | chr2:179419477;179419476;179419475 |
N2AB | 27892 | 83899;83900;83901 | chr2:178554750;178554749;178554748 | chr2:179419477;179419476;179419475 |
N2A | 26965 | 81118;81119;81120 | chr2:178554750;178554749;178554748 | chr2:179419477;179419476;179419475 |
N2B | 20468 | 61627;61628;61629 | chr2:178554750;178554749;178554748 | chr2:179419477;179419476;179419475 |
Novex-1 | 20593 | 62002;62003;62004 | chr2:178554750;178554749;178554748 | chr2:179419477;179419476;179419475 |
Novex-2 | 20660 | 62203;62204;62205 | chr2:178554750;178554749;178554748 | chr2:179419477;179419476;179419475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.999 | N | 0.807 | 0.305 | 0.156986980423 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.534 | ambiguous | 0.5441 | ambiguous | -0.179 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | I |
K/C | 0.7037 | likely_pathogenic | 0.7149 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
K/D | 0.9104 | likely_pathogenic | 0.9197 | pathogenic | 0.21 | Stabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | I |
K/E | 0.3941 | ambiguous | 0.4143 | ambiguous | 0.235 | Stabilizing | 0.997 | D | 0.787 | deleterious | N | 0.483862455 | None | None | I |
K/F | 0.8912 | likely_pathogenic | 0.8972 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
K/G | 0.784 | likely_pathogenic | 0.7996 | pathogenic | -0.423 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/H | 0.4982 | ambiguous | 0.5122 | ambiguous | -0.737 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
K/I | 0.332 | likely_benign | 0.3389 | benign | 0.395 | Stabilizing | 0.999 | D | 0.844 | deleterious | N | 0.465251221 | None | None | I |
K/L | 0.5196 | ambiguous | 0.5222 | ambiguous | 0.395 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/M | 0.3207 | likely_benign | 0.327 | benign | 0.304 | Stabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
K/N | 0.7252 | likely_pathogenic | 0.7451 | pathogenic | 0.154 | Stabilizing | 0.999 | D | 0.807 | deleterious | N | 0.484369434 | None | None | I |
K/P | 0.8527 | likely_pathogenic | 0.8682 | pathogenic | 0.233 | Stabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
K/Q | 0.2088 | likely_benign | 0.218 | benign | -0.069 | Destabilizing | 0.999 | D | 0.831 | deleterious | N | 0.484369434 | None | None | I |
K/R | 0.087 | likely_benign | 0.0881 | benign | -0.093 | Destabilizing | 0.997 | D | 0.688 | prob.delet. | N | 0.433139613 | None | None | I |
K/S | 0.6429 | likely_pathogenic | 0.6614 | pathogenic | -0.468 | Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | I |
K/T | 0.2211 | likely_benign | 0.2296 | benign | -0.278 | Destabilizing | 0.999 | D | 0.798 | deleterious | N | 0.455211588 | None | None | I |
K/V | 0.295 | likely_benign | 0.305 | benign | 0.233 | Stabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | I |
K/W | 0.9262 | likely_pathogenic | 0.9301 | pathogenic | -0.176 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
K/Y | 0.8166 | likely_pathogenic | 0.8248 | pathogenic | 0.156 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.