Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29536 | 88831;88832;88833 | chr2:178554741;178554740;178554739 | chr2:179419468;179419467;179419466 |
N2AB | 27895 | 83908;83909;83910 | chr2:178554741;178554740;178554739 | chr2:179419468;179419467;179419466 |
N2A | 26968 | 81127;81128;81129 | chr2:178554741;178554740;178554739 | chr2:179419468;179419467;179419466 |
N2B | 20471 | 61636;61637;61638 | chr2:178554741;178554740;178554739 | chr2:179419468;179419467;179419466 |
Novex-1 | 20596 | 62011;62012;62013 | chr2:178554741;178554740;178554739 | chr2:179419468;179419467;179419466 |
Novex-2 | 20663 | 62212;62213;62214 | chr2:178554741;178554740;178554739 | chr2:179419468;179419467;179419466 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs928055260 | None | 1.0 | N | 0.873 | 0.469 | 0.721917965023 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02535E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0913 | likely_benign | 0.092 | benign | -1.548 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.49967961 | None | None | N |
P/C | 0.4162 | ambiguous | 0.441 | ambiguous | -1.023 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
P/D | 0.6747 | likely_pathogenic | 0.704 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/E | 0.3582 | ambiguous | 0.3805 | ambiguous | -1.634 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/F | 0.4319 | ambiguous | 0.4597 | ambiguous | -1.33 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
P/G | 0.4606 | ambiguous | 0.4909 | ambiguous | -1.831 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
P/H | 0.2237 | likely_benign | 0.2485 | benign | -1.341 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
P/I | 0.2285 | likely_benign | 0.2081 | benign | -0.874 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
P/K | 0.2145 | likely_benign | 0.2167 | benign | -1.216 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/L | 0.1166 | likely_benign | 0.116 | benign | -0.874 | Destabilizing | 1.0 | D | 0.873 | deleterious | N | 0.504107801 | None | None | N |
P/M | 0.2634 | likely_benign | 0.2722 | benign | -0.629 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
P/N | 0.4798 | ambiguous | 0.5013 | ambiguous | -0.974 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/Q | 0.1603 | likely_benign | 0.1686 | benign | -1.229 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.492586912 | None | None | N |
P/R | 0.1545 | likely_benign | 0.1599 | benign | -0.631 | Destabilizing | 1.0 | D | 0.883 | deleterious | N | 0.500348819 | None | None | N |
P/S | 0.1813 | likely_benign | 0.1946 | benign | -1.443 | Destabilizing | 1.0 | D | 0.844 | deleterious | N | 0.487978556 | None | None | N |
P/T | 0.1536 | likely_benign | 0.1491 | benign | -1.377 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.490625129 | None | None | N |
P/V | 0.1777 | likely_benign | 0.1634 | benign | -1.065 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
P/W | 0.6958 | likely_pathogenic | 0.7336 | pathogenic | -1.47 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/Y | 0.4644 | ambiguous | 0.5005 | ambiguous | -1.2 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.