Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29537 | 88834;88835;88836 | chr2:178554738;178554737;178554736 | chr2:179419465;179419464;179419463 |
N2AB | 27896 | 83911;83912;83913 | chr2:178554738;178554737;178554736 | chr2:179419465;179419464;179419463 |
N2A | 26969 | 81130;81131;81132 | chr2:178554738;178554737;178554736 | chr2:179419465;179419464;179419463 |
N2B | 20472 | 61639;61640;61641 | chr2:178554738;178554737;178554736 | chr2:179419465;179419464;179419463 |
Novex-1 | 20597 | 62014;62015;62016 | chr2:178554738;178554737;178554736 | chr2:179419465;179419464;179419463 |
Novex-2 | 20664 | 62215;62216;62217 | chr2:178554738;178554737;178554736 | chr2:179419465;179419464;179419463 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1482625198 | -1.768 | 0.999 | D | 0.907 | 0.659 | 0.892145347143 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2417 | likely_benign | 0.2712 | benign | -2.217 | Highly Destabilizing | 0.992 | D | 0.798 | deleterious | D | 0.576082206 | None | None | N |
P/C | 0.6541 | likely_pathogenic | 0.7268 | pathogenic | -1.908 | Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
P/D | 0.9945 | likely_pathogenic | 0.9959 | pathogenic | -3.266 | Highly Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
P/E | 0.9804 | likely_pathogenic | 0.9845 | pathogenic | -3.023 | Highly Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
P/F | 0.9879 | likely_pathogenic | 0.992 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.936 | deleterious | None | None | None | None | N |
P/G | 0.934 | likely_pathogenic | 0.9481 | pathogenic | -2.762 | Highly Destabilizing | 0.997 | D | 0.861 | deleterious | None | None | None | None | N |
P/H | 0.9791 | likely_pathogenic | 0.9847 | pathogenic | -2.573 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.627763843 | None | None | N |
P/I | 0.5474 | ambiguous | 0.643 | pathogenic | -0.671 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
P/K | 0.991 | likely_pathogenic | 0.9936 | pathogenic | -1.88 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
P/L | 0.5781 | likely_pathogenic | 0.6668 | pathogenic | -0.671 | Destabilizing | 0.999 | D | 0.913 | deleterious | D | 0.595321512 | None | None | N |
P/M | 0.8714 | likely_pathogenic | 0.9077 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
P/N | 0.9863 | likely_pathogenic | 0.9897 | pathogenic | -2.322 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
P/Q | 0.9632 | likely_pathogenic | 0.9724 | pathogenic | -2.116 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
P/R | 0.9732 | likely_pathogenic | 0.9806 | pathogenic | -1.75 | Destabilizing | 0.999 | D | 0.907 | deleterious | D | 0.627562038 | None | None | N |
P/S | 0.7193 | likely_pathogenic | 0.7548 | pathogenic | -2.857 | Highly Destabilizing | 0.957 | D | 0.702 | prob.neutral | D | 0.601822122 | None | None | N |
P/T | 0.5212 | ambiguous | 0.5781 | pathogenic | -2.479 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | D | 0.611542677 | None | None | N |
P/V | 0.2957 | likely_benign | 0.3495 | ambiguous | -1.163 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
P/W | 0.9978 | likely_pathogenic | 0.9985 | pathogenic | -1.803 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/Y | 0.9951 | likely_pathogenic | 0.9966 | pathogenic | -1.449 | Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.