Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29543 | 88852;88853;88854 | chr2:178554720;178554719;178554718 | chr2:179419447;179419446;179419445 |
N2AB | 27902 | 83929;83930;83931 | chr2:178554720;178554719;178554718 | chr2:179419447;179419446;179419445 |
N2A | 26975 | 81148;81149;81150 | chr2:178554720;178554719;178554718 | chr2:179419447;179419446;179419445 |
N2B | 20478 | 61657;61658;61659 | chr2:178554720;178554719;178554718 | chr2:179419447;179419446;179419445 |
Novex-1 | 20603 | 62032;62033;62034 | chr2:178554720;178554719;178554718 | chr2:179419447;179419446;179419445 |
Novex-2 | 20670 | 62233;62234;62235 | chr2:178554720;178554719;178554718 | chr2:179419447;179419446;179419445 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs948542254 | None | 0.998 | N | 0.781 | 0.499 | 0.746204736577 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
F/S | rs948542254 | None | 0.998 | N | 0.781 | 0.499 | 0.746204736577 | gnomAD-4.0.0 | 3.71806E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08541E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8895 | likely_pathogenic | 0.8817 | pathogenic | -2.386 | Highly Destabilizing | 0.992 | D | 0.65 | neutral | None | None | None | None | N |
F/C | 0.4738 | ambiguous | 0.4825 | ambiguous | -1.855 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.475693604 | None | None | N |
F/D | 0.9819 | likely_pathogenic | 0.98 | pathogenic | -1.38 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
F/E | 0.9746 | likely_pathogenic | 0.9697 | pathogenic | -1.207 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
F/G | 0.9544 | likely_pathogenic | 0.9522 | pathogenic | -2.798 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
F/H | 0.8883 | likely_pathogenic | 0.8638 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
F/I | 0.3029 | likely_benign | 0.3276 | benign | -1.096 | Destabilizing | 0.978 | D | 0.537 | neutral | N | 0.40252121 | None | None | N |
F/K | 0.9613 | likely_pathogenic | 0.9513 | pathogenic | -1.853 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
F/L | 0.9128 | likely_pathogenic | 0.9235 | pathogenic | -1.096 | Destabilizing | 0.948 | D | 0.539 | neutral | N | 0.450371085 | None | None | N |
F/M | 0.6416 | likely_pathogenic | 0.6566 | pathogenic | -1.016 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | N |
F/N | 0.9164 | likely_pathogenic | 0.9089 | pathogenic | -2.134 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
F/P | 0.9742 | likely_pathogenic | 0.9741 | pathogenic | -1.527 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
F/Q | 0.9504 | likely_pathogenic | 0.9397 | pathogenic | -2.031 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
F/R | 0.9445 | likely_pathogenic | 0.9332 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
F/S | 0.8809 | likely_pathogenic | 0.8741 | pathogenic | -2.984 | Highly Destabilizing | 0.998 | D | 0.781 | deleterious | N | 0.507939308 | None | None | N |
F/T | 0.869 | likely_pathogenic | 0.8616 | pathogenic | -2.697 | Highly Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
F/V | 0.3836 | ambiguous | 0.3843 | ambiguous | -1.527 | Destabilizing | 0.543 | D | 0.364 | neutral | N | 0.37812141 | None | None | N |
F/W | 0.6482 | likely_pathogenic | 0.6467 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
F/Y | 0.2396 | likely_benign | 0.2188 | benign | -0.501 | Destabilizing | 0.998 | D | 0.619 | neutral | N | 0.485563881 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.