Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29546 | 88861;88862;88863 | chr2:178554711;178554710;178554709 | chr2:179419438;179419437;179419436 |
N2AB | 27905 | 83938;83939;83940 | chr2:178554711;178554710;178554709 | chr2:179419438;179419437;179419436 |
N2A | 26978 | 81157;81158;81159 | chr2:178554711;178554710;178554709 | chr2:179419438;179419437;179419436 |
N2B | 20481 | 61666;61667;61668 | chr2:178554711;178554710;178554709 | chr2:179419438;179419437;179419436 |
Novex-1 | 20606 | 62041;62042;62043 | chr2:178554711;178554710;178554709 | chr2:179419438;179419437;179419436 |
Novex-2 | 20673 | 62242;62243;62244 | chr2:178554711;178554710;178554709 | chr2:179419438;179419437;179419436 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs758393823 | -0.687 | 0.046 | N | 0.208 | 0.064 | 0.410204130746 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
V/I | rs758393823 | -0.687 | 0.046 | N | 0.208 | 0.064 | 0.410204130746 | gnomAD-4.0.0 | 7.52593E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.03854E-05 | None | 0 | 0 | 6.29595E-06 | 1.15955E-05 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5795 | likely_pathogenic | 0.5576 | ambiguous | -1.602 | Destabilizing | 0.939 | D | 0.441 | neutral | D | 0.524082196 | None | None | N |
V/C | 0.8923 | likely_pathogenic | 0.8883 | pathogenic | -1.546 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/D | 0.9504 | likely_pathogenic | 0.9422 | pathogenic | -1.601 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
V/E | 0.8392 | likely_pathogenic | 0.8181 | pathogenic | -1.571 | Destabilizing | 0.997 | D | 0.757 | deleterious | N | 0.49952958 | None | None | N |
V/F | 0.5793 | likely_pathogenic | 0.5828 | pathogenic | -1.395 | Destabilizing | 0.986 | D | 0.744 | deleterious | None | None | None | None | N |
V/G | 0.8038 | likely_pathogenic | 0.7832 | pathogenic | -1.941 | Destabilizing | 0.997 | D | 0.803 | deleterious | N | 0.516192257 | None | None | N |
V/H | 0.9397 | likely_pathogenic | 0.9368 | pathogenic | -1.552 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
V/I | 0.0716 | likely_benign | 0.0747 | benign | -0.753 | Destabilizing | 0.046 | N | 0.208 | neutral | N | 0.459972003 | None | None | N |
V/K | 0.7944 | likely_pathogenic | 0.7716 | pathogenic | -1.227 | Destabilizing | 0.993 | D | 0.757 | deleterious | None | None | None | None | N |
V/L | 0.4169 | ambiguous | 0.4097 | ambiguous | -0.753 | Destabilizing | 0.76 | D | 0.332 | neutral | N | 0.468801572 | None | None | N |
V/M | 0.2731 | likely_benign | 0.2707 | benign | -0.753 | Destabilizing | 0.986 | D | 0.666 | neutral | None | None | None | None | N |
V/N | 0.8334 | likely_pathogenic | 0.8233 | pathogenic | -1.163 | Destabilizing | 0.998 | D | 0.806 | deleterious | None | None | None | None | N |
V/P | 0.9608 | likely_pathogenic | 0.9586 | pathogenic | -1.003 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
V/Q | 0.7674 | likely_pathogenic | 0.7513 | pathogenic | -1.313 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | N |
V/R | 0.773 | likely_pathogenic | 0.7453 | pathogenic | -0.824 | Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
V/S | 0.7474 | likely_pathogenic | 0.7282 | pathogenic | -1.761 | Destabilizing | 0.993 | D | 0.755 | deleterious | None | None | None | None | N |
V/T | 0.5135 | ambiguous | 0.4885 | ambiguous | -1.609 | Destabilizing | 0.953 | D | 0.547 | neutral | None | None | None | None | N |
V/W | 0.9786 | likely_pathogenic | 0.9785 | pathogenic | -1.597 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/Y | 0.9126 | likely_pathogenic | 0.9077 | pathogenic | -1.255 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.