Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29549 | 88870;88871;88872 | chr2:178554702;178554701;178554700 | chr2:179419429;179419428;179419427 |
N2AB | 27908 | 83947;83948;83949 | chr2:178554702;178554701;178554700 | chr2:179419429;179419428;179419427 |
N2A | 26981 | 81166;81167;81168 | chr2:178554702;178554701;178554700 | chr2:179419429;179419428;179419427 |
N2B | 20484 | 61675;61676;61677 | chr2:178554702;178554701;178554700 | chr2:179419429;179419428;179419427 |
Novex-1 | 20609 | 62050;62051;62052 | chr2:178554702;178554701;178554700 | chr2:179419429;179419428;179419427 |
Novex-2 | 20676 | 62251;62252;62253 | chr2:178554702;178554701;178554700 | chr2:179419429;179419428;179419427 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs779704459 | -1.12 | 0.722 | N | 0.491 | 0.24 | 0.287603790349 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 8.26E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.81E-06 | 0 |
E/G | rs779704459 | -1.12 | 0.722 | N | 0.491 | 0.24 | 0.287603790349 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs779704459 | -1.12 | 0.722 | N | 0.491 | 0.24 | 0.287603790349 | gnomAD-4.0.0 | 6.19665E-06 | None | None | None | None | N | None | 4.0062E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93289E-06 | 0 | 0 |
E/K | None | None | 0.722 | N | 0.517 | 0.256 | 0.200317383148 | gnomAD-4.0.0 | 3.42089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49711E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.658 | likely_pathogenic | 0.5649 | pathogenic | -0.389 | Destabilizing | 0.565 | D | 0.485 | neutral | N | 0.506128367 | None | None | N |
E/C | 0.9864 | likely_pathogenic | 0.9807 | pathogenic | -0.096 | Destabilizing | 0.996 | D | 0.543 | neutral | None | None | None | None | N |
E/D | 0.2947 | likely_benign | 0.2406 | benign | -0.352 | Destabilizing | 0.003 | N | 0.105 | neutral | N | 0.400787626 | None | None | N |
E/F | 0.988 | likely_pathogenic | 0.9827 | pathogenic | -0.243 | Destabilizing | 0.961 | D | 0.515 | neutral | None | None | None | None | N |
E/G | 0.4753 | ambiguous | 0.3961 | ambiguous | -0.586 | Destabilizing | 0.722 | D | 0.491 | neutral | N | 0.486118454 | None | None | N |
E/H | 0.9205 | likely_pathogenic | 0.893 | pathogenic | 0.025 | Stabilizing | 0.987 | D | 0.438 | neutral | None | None | None | None | N |
E/I | 0.9565 | likely_pathogenic | 0.9316 | pathogenic | 0.095 | Stabilizing | 0.858 | D | 0.513 | neutral | None | None | None | None | N |
E/K | 0.6774 | likely_pathogenic | 0.5953 | pathogenic | 0.291 | Stabilizing | 0.722 | D | 0.517 | neutral | N | 0.491870991 | None | None | N |
E/L | 0.9296 | likely_pathogenic | 0.8978 | pathogenic | 0.095 | Stabilizing | 0.633 | D | 0.471 | neutral | None | None | None | None | N |
E/M | 0.9364 | likely_pathogenic | 0.9082 | pathogenic | 0.16 | Stabilizing | 0.989 | D | 0.469 | neutral | None | None | None | None | N |
E/N | 0.6723 | likely_pathogenic | 0.5701 | pathogenic | -0.047 | Destabilizing | 0.775 | D | 0.491 | neutral | None | None | None | None | N |
E/P | 0.9889 | likely_pathogenic | 0.9854 | pathogenic | -0.047 | Destabilizing | 0.961 | D | 0.463 | neutral | None | None | None | None | N |
E/Q | 0.4761 | ambiguous | 0.4108 | ambiguous | -0.012 | Destabilizing | 0.84 | D | 0.493 | neutral | N | 0.502087984 | None | None | N |
E/R | 0.8022 | likely_pathogenic | 0.7456 | pathogenic | 0.52 | Stabilizing | 0.923 | D | 0.467 | neutral | None | None | None | None | N |
E/S | 0.6085 | likely_pathogenic | 0.5217 | ambiguous | -0.209 | Destabilizing | 0.633 | D | 0.476 | neutral | None | None | None | None | N |
E/T | 0.7208 | likely_pathogenic | 0.5875 | pathogenic | -0.047 | Destabilizing | 0.011 | N | 0.247 | neutral | None | None | None | None | N |
E/V | 0.8748 | likely_pathogenic | 0.811 | pathogenic | -0.047 | Destabilizing | 0.565 | D | 0.459 | neutral | N | 0.477293813 | None | None | N |
E/W | 0.9927 | likely_pathogenic | 0.9903 | pathogenic | -0.084 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | N |
E/Y | 0.9725 | likely_pathogenic | 0.9597 | pathogenic | 0.001 | Stabilizing | 0.987 | D | 0.485 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.