Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29551 | 88876;88877;88878 | chr2:178554696;178554695;178554694 | chr2:179419423;179419422;179419421 |
N2AB | 27910 | 83953;83954;83955 | chr2:178554696;178554695;178554694 | chr2:179419423;179419422;179419421 |
N2A | 26983 | 81172;81173;81174 | chr2:178554696;178554695;178554694 | chr2:179419423;179419422;179419421 |
N2B | 20486 | 61681;61682;61683 | chr2:178554696;178554695;178554694 | chr2:179419423;179419422;179419421 |
Novex-1 | 20611 | 62056;62057;62058 | chr2:178554696;178554695;178554694 | chr2:179419423;179419422;179419421 |
Novex-2 | 20678 | 62257;62258;62259 | chr2:178554696;178554695;178554694 | chr2:179419423;179419422;179419421 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.549 | D | 0.789 | 0.391 | 0.726905758573 | gnomAD-4.0.0 | 2.73664E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59769E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8231 | likely_pathogenic | 0.8613 | pathogenic | -2.856 | Highly Destabilizing | 0.25 | N | 0.684 | prob.neutral | None | None | None | None | N |
I/C | 0.8061 | likely_pathogenic | 0.8149 | pathogenic | -2.599 | Highly Destabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | N |
I/D | 0.9976 | likely_pathogenic | 0.9978 | pathogenic | -3.077 | Highly Destabilizing | 0.972 | D | 0.823 | deleterious | None | None | None | None | N |
I/E | 0.993 | likely_pathogenic | 0.9936 | pathogenic | -2.772 | Highly Destabilizing | 0.92 | D | 0.812 | deleterious | None | None | None | None | N |
I/F | 0.4944 | ambiguous | 0.5472 | ambiguous | -1.747 | Destabilizing | 0.81 | D | 0.727 | prob.delet. | N | 0.507824665 | None | None | N |
I/G | 0.9777 | likely_pathogenic | 0.9831 | pathogenic | -3.474 | Highly Destabilizing | 0.92 | D | 0.802 | deleterious | None | None | None | None | N |
I/H | 0.9886 | likely_pathogenic | 0.9895 | pathogenic | -2.982 | Highly Destabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | N |
I/K | 0.9885 | likely_pathogenic | 0.9887 | pathogenic | -2.104 | Highly Destabilizing | 0.85 | D | 0.813 | deleterious | None | None | None | None | N |
I/L | 0.1982 | likely_benign | 0.2291 | benign | -1.016 | Destabilizing | 0.036 | N | 0.505 | neutral | N | 0.432398613 | None | None | N |
I/M | 0.1315 | likely_benign | 0.1376 | benign | -1.392 | Destabilizing | 0.016 | N | 0.417 | neutral | N | 0.479715344 | None | None | N |
I/N | 0.9553 | likely_pathogenic | 0.9594 | pathogenic | -2.679 | Highly Destabilizing | 0.896 | D | 0.827 | deleterious | N | 0.494783093 | None | None | N |
I/P | 0.9971 | likely_pathogenic | 0.9978 | pathogenic | -1.617 | Destabilizing | 0.972 | D | 0.827 | deleterious | None | None | None | None | N |
I/Q | 0.9822 | likely_pathogenic | 0.9836 | pathogenic | -2.388 | Highly Destabilizing | 0.92 | D | 0.826 | deleterious | None | None | None | None | N |
I/R | 0.9822 | likely_pathogenic | 0.9836 | pathogenic | -2.062 | Highly Destabilizing | 0.85 | D | 0.826 | deleterious | None | None | None | None | N |
I/S | 0.9347 | likely_pathogenic | 0.949 | pathogenic | -3.441 | Highly Destabilizing | 0.549 | D | 0.784 | deleterious | N | 0.471816993 | None | None | N |
I/T | 0.8889 | likely_pathogenic | 0.9119 | pathogenic | -2.958 | Highly Destabilizing | 0.549 | D | 0.789 | deleterious | D | 0.524063554 | None | None | N |
I/V | 0.106 | likely_benign | 0.1142 | benign | -1.617 | Destabilizing | 0.002 | N | 0.215 | neutral | N | 0.382121721 | None | None | N |
I/W | 0.9865 | likely_pathogenic | 0.9876 | pathogenic | -2.022 | Highly Destabilizing | 0.992 | D | 0.788 | deleterious | None | None | None | None | N |
I/Y | 0.9277 | likely_pathogenic | 0.9312 | pathogenic | -1.823 | Destabilizing | 0.92 | D | 0.836 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.