Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29561 | 88906;88907;88908 | chr2:178554666;178554665;178554664 | chr2:179419393;179419392;179419391 |
N2AB | 27920 | 83983;83984;83985 | chr2:178554666;178554665;178554664 | chr2:179419393;179419392;179419391 |
N2A | 26993 | 81202;81203;81204 | chr2:178554666;178554665;178554664 | chr2:179419393;179419392;179419391 |
N2B | 20496 | 61711;61712;61713 | chr2:178554666;178554665;178554664 | chr2:179419393;179419392;179419391 |
Novex-1 | 20621 | 62086;62087;62088 | chr2:178554666;178554665;178554664 | chr2:179419393;179419392;179419391 |
Novex-2 | 20688 | 62287;62288;62289 | chr2:178554666;178554665;178554664 | chr2:179419393;179419392;179419391 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs1700645237 | None | 1.0 | N | 0.708 | 0.312 | 0.413891365518 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.48 | ambiguous | 0.5574 | ambiguous | -0.251 | Destabilizing | 0.978 | D | 0.648 | neutral | N | 0.486968279 | None | None | N |
D/C | 0.8386 | likely_pathogenic | 0.8686 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
D/E | 0.4934 | ambiguous | 0.5637 | ambiguous | -0.702 | Destabilizing | 0.198 | N | 0.126 | neutral | N | 0.468508402 | None | None | N |
D/F | 0.8736 | likely_pathogenic | 0.9087 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
D/G | 0.5036 | ambiguous | 0.5938 | pathogenic | -0.515 | Destabilizing | 0.989 | D | 0.597 | neutral | N | 0.502314283 | None | None | N |
D/H | 0.5672 | likely_pathogenic | 0.6509 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.493160024 | None | None | N |
D/I | 0.6938 | likely_pathogenic | 0.7423 | pathogenic | 0.411 | Stabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
D/K | 0.7717 | likely_pathogenic | 0.8089 | pathogenic | 0.045 | Stabilizing | 0.983 | D | 0.601 | neutral | None | None | None | None | N |
D/L | 0.7533 | likely_pathogenic | 0.7984 | pathogenic | 0.411 | Stabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
D/M | 0.8484 | likely_pathogenic | 0.8843 | pathogenic | 0.839 | Stabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
D/N | 0.1176 | likely_benign | 0.1387 | benign | -0.24 | Destabilizing | 0.989 | D | 0.593 | neutral | N | 0.499338468 | None | None | N |
D/P | 0.9055 | likely_pathogenic | 0.931 | pathogenic | 0.215 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/Q | 0.7071 | likely_pathogenic | 0.7709 | pathogenic | -0.171 | Destabilizing | 0.995 | D | 0.652 | neutral | None | None | None | None | N |
D/R | 0.7662 | likely_pathogenic | 0.8179 | pathogenic | -0.014 | Destabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | N |
D/S | 0.2311 | likely_benign | 0.2942 | benign | -0.377 | Destabilizing | 0.983 | D | 0.526 | neutral | None | None | None | None | N |
D/T | 0.3893 | ambiguous | 0.4615 | ambiguous | -0.168 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
D/V | 0.561 | ambiguous | 0.62 | pathogenic | 0.215 | Stabilizing | 0.997 | D | 0.757 | deleterious | N | 0.512567725 | None | None | N |
D/W | 0.9723 | likely_pathogenic | 0.9808 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/Y | 0.5553 | ambiguous | 0.6215 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.531774844 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.