Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29582 | 88969;88970;88971 | chr2:178554603;178554602;178554601 | chr2:179419330;179419329;179419328 |
N2AB | 27941 | 84046;84047;84048 | chr2:178554603;178554602;178554601 | chr2:179419330;179419329;179419328 |
N2A | 27014 | 81265;81266;81267 | chr2:178554603;178554602;178554601 | chr2:179419330;179419329;179419328 |
N2B | 20517 | 61774;61775;61776 | chr2:178554603;178554602;178554601 | chr2:179419330;179419329;179419328 |
Novex-1 | 20642 | 62149;62150;62151 | chr2:178554603;178554602;178554601 | chr2:179419330;179419329;179419328 |
Novex-2 | 20709 | 62350;62351;62352 | chr2:178554603;178554602;178554601 | chr2:179419330;179419329;179419328 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | N | 0.679 | 0.383 | 0.583395719892 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1569 | likely_benign | 0.1619 | benign | -0.524 | Destabilizing | 0.973 | D | 0.395 | neutral | N | 0.448792217 | None | None | I |
S/C | 0.2549 | likely_benign | 0.2699 | benign | -0.393 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.469420228 | None | None | I |
S/D | 0.8953 | likely_pathogenic | 0.9148 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.569 | neutral | None | None | None | None | I |
S/E | 0.914 | likely_pathogenic | 0.9265 | pathogenic | 0.161 | Stabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | I |
S/F | 0.6792 | likely_pathogenic | 0.7235 | pathogenic | -0.749 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | N | 0.45135252 | None | None | I |
S/G | 0.2105 | likely_benign | 0.2159 | benign | -0.744 | Destabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
S/H | 0.778 | likely_pathogenic | 0.7998 | pathogenic | -1.084 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
S/I | 0.5283 | ambiguous | 0.5596 | ambiguous | -0.056 | Destabilizing | 0.983 | D | 0.575 | neutral | None | None | None | None | I |
S/K | 0.9751 | likely_pathogenic | 0.9792 | pathogenic | -0.583 | Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | I |
S/L | 0.304 | likely_benign | 0.3254 | benign | -0.056 | Destabilizing | 0.983 | D | 0.517 | neutral | None | None | None | None | I |
S/M | 0.3856 | ambiguous | 0.3975 | ambiguous | -0.002 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
S/N | 0.3898 | ambiguous | 0.4024 | ambiguous | -0.47 | Destabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | I |
S/P | 0.9581 | likely_pathogenic | 0.9621 | pathogenic | -0.178 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.46840627 | None | None | I |
S/Q | 0.8482 | likely_pathogenic | 0.8554 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
S/R | 0.9641 | likely_pathogenic | 0.9703 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
S/T | 0.1497 | likely_benign | 0.1447 | benign | -0.526 | Destabilizing | 0.989 | D | 0.483 | neutral | N | 0.389706628 | None | None | I |
S/V | 0.4533 | ambiguous | 0.4725 | ambiguous | -0.178 | Destabilizing | 0.611 | D | 0.356 | neutral | None | None | None | None | I |
S/W | 0.7534 | likely_pathogenic | 0.8005 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
S/Y | 0.5835 | likely_pathogenic | 0.6271 | pathogenic | -0.487 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | N | 0.475402815 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.