Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29584 | 88975;88976;88977 | chr2:178554597;178554596;178554595 | chr2:179419324;179419323;179419322 |
N2AB | 27943 | 84052;84053;84054 | chr2:178554597;178554596;178554595 | chr2:179419324;179419323;179419322 |
N2A | 27016 | 81271;81272;81273 | chr2:178554597;178554596;178554595 | chr2:179419324;179419323;179419322 |
N2B | 20519 | 61780;61781;61782 | chr2:178554597;178554596;178554595 | chr2:179419324;179419323;179419322 |
Novex-1 | 20644 | 62155;62156;62157 | chr2:178554597;178554596;178554595 | chr2:179419324;179419323;179419322 |
Novex-2 | 20711 | 62356;62357;62358 | chr2:178554597;178554596;178554595 | chr2:179419324;179419323;179419322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1356142891 | -1.364 | 0.939 | N | 0.487 | 0.335 | 0.51759925163 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
V/A | rs1356142891 | -1.364 | 0.939 | N | 0.487 | 0.335 | 0.51759925163 | gnomAD-4.0.0 | 3.18202E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71549E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4363 | ambiguous | 0.4303 | ambiguous | -1.145 | Destabilizing | 0.939 | D | 0.487 | neutral | N | 0.466849334 | None | None | I |
V/C | 0.8794 | likely_pathogenic | 0.8803 | pathogenic | -0.947 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | I |
V/D | 0.9428 | likely_pathogenic | 0.9362 | pathogenic | -0.385 | Destabilizing | 0.998 | D | 0.82 | deleterious | None | None | None | None | I |
V/E | 0.8631 | likely_pathogenic | 0.8579 | pathogenic | -0.354 | Destabilizing | 0.997 | D | 0.791 | deleterious | N | 0.502880033 | None | None | I |
V/F | 0.4715 | ambiguous | 0.4578 | ambiguous | -0.745 | Destabilizing | 0.986 | D | 0.813 | deleterious | None | None | None | None | I |
V/G | 0.7346 | likely_pathogenic | 0.7287 | pathogenic | -1.482 | Destabilizing | 0.997 | D | 0.795 | deleterious | N | 0.50917391 | None | None | I |
V/H | 0.9464 | likely_pathogenic | 0.9467 | pathogenic | -0.884 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | I |
V/I | 0.0952 | likely_benign | 0.0922 | benign | -0.325 | Destabilizing | 0.06 | N | 0.238 | neutral | None | None | None | None | I |
V/K | 0.9334 | likely_pathogenic | 0.9339 | pathogenic | -0.841 | Destabilizing | 0.993 | D | 0.796 | deleterious | None | None | None | None | I |
V/L | 0.3508 | ambiguous | 0.3008 | benign | -0.325 | Destabilizing | 0.76 | D | 0.425 | neutral | N | 0.47822969 | None | None | I |
V/M | 0.3412 | ambiguous | 0.2772 | benign | -0.403 | Destabilizing | 0.982 | D | 0.718 | prob.delet. | N | 0.501033609 | None | None | I |
V/N | 0.8741 | likely_pathogenic | 0.8543 | pathogenic | -0.759 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | I |
V/P | 0.9617 | likely_pathogenic | 0.9582 | pathogenic | -0.562 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | I |
V/Q | 0.8633 | likely_pathogenic | 0.8572 | pathogenic | -0.811 | Destabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | I |
V/R | 0.9144 | likely_pathogenic | 0.9191 | pathogenic | -0.475 | Destabilizing | 0.998 | D | 0.82 | deleterious | None | None | None | None | I |
V/S | 0.732 | likely_pathogenic | 0.7179 | pathogenic | -1.396 | Destabilizing | 0.993 | D | 0.779 | deleterious | None | None | None | None | I |
V/T | 0.5961 | likely_pathogenic | 0.5725 | pathogenic | -1.228 | Destabilizing | 0.953 | D | 0.605 | neutral | None | None | None | None | I |
V/W | 0.9748 | likely_pathogenic | 0.9755 | pathogenic | -0.919 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
V/Y | 0.8861 | likely_pathogenic | 0.8865 | pathogenic | -0.59 | Destabilizing | 0.998 | D | 0.818 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.