Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29586 | 88981;88982;88983 | chr2:178554591;178554590;178554589 | chr2:179419318;179419317;179419316 |
N2AB | 27945 | 84058;84059;84060 | chr2:178554591;178554590;178554589 | chr2:179419318;179419317;179419316 |
N2A | 27018 | 81277;81278;81279 | chr2:178554591;178554590;178554589 | chr2:179419318;179419317;179419316 |
N2B | 20521 | 61786;61787;61788 | chr2:178554591;178554590;178554589 | chr2:179419318;179419317;179419316 |
Novex-1 | 20646 | 62161;62162;62163 | chr2:178554591;178554590;178554589 | chr2:179419318;179419317;179419316 |
Novex-2 | 20713 | 62362;62363;62364 | chr2:178554591;178554590;178554589 | chr2:179419318;179419317;179419316 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.559 | 0.339 | 0.336155897331 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2128 | likely_benign | 0.1951 | benign | -0.476 | Destabilizing | 0.999 | D | 0.658 | neutral | N | 0.512648908 | None | None | N |
E/C | 0.905 | likely_pathogenic | 0.8775 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/D | 0.1177 | likely_benign | 0.1166 | benign | -0.373 | Destabilizing | 0.999 | D | 0.4 | neutral | N | 0.489889478 | None | None | N |
E/F | 0.9057 | likely_pathogenic | 0.8825 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/G | 0.1986 | likely_benign | 0.1743 | benign | -0.7 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.505936366 | None | None | N |
E/H | 0.582 | likely_pathogenic | 0.5441 | ambiguous | 0.038 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/I | 0.6423 | likely_pathogenic | 0.5989 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/K | 0.2383 | likely_benign | 0.1985 | benign | 0.171 | Stabilizing | 0.999 | D | 0.559 | neutral | N | 0.516364003 | None | None | N |
E/L | 0.6063 | likely_pathogenic | 0.5681 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/M | 0.6775 | likely_pathogenic | 0.6389 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/N | 0.2833 | likely_benign | 0.2686 | benign | -0.181 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/P | 0.5119 | ambiguous | 0.5198 | ambiguous | -0.075 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/Q | 0.1766 | likely_benign | 0.1635 | benign | -0.117 | Destabilizing | 1.0 | D | 0.632 | neutral | N | 0.46668475 | None | None | N |
E/R | 0.3865 | ambiguous | 0.3366 | benign | 0.465 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/S | 0.2014 | likely_benign | 0.1919 | benign | -0.373 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
E/T | 0.2967 | likely_benign | 0.2661 | benign | -0.184 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/V | 0.4106 | ambiguous | 0.3767 | ambiguous | -0.075 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.477500261 | None | None | N |
E/W | 0.9599 | likely_pathogenic | 0.9477 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/Y | 0.7885 | likely_pathogenic | 0.7571 | pathogenic | 0.033 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.