Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29589 | 88990;88991;88992 | chr2:178554582;178554581;178554580 | chr2:179419309;179419308;179419307 |
N2AB | 27948 | 84067;84068;84069 | chr2:178554582;178554581;178554580 | chr2:179419309;179419308;179419307 |
N2A | 27021 | 81286;81287;81288 | chr2:178554582;178554581;178554580 | chr2:179419309;179419308;179419307 |
N2B | 20524 | 61795;61796;61797 | chr2:178554582;178554581;178554580 | chr2:179419309;179419308;179419307 |
Novex-1 | 20649 | 62170;62171;62172 | chr2:178554582;178554581;178554580 | chr2:179419309;179419308;179419307 |
Novex-2 | 20716 | 62371;62372;62373 | chr2:178554582;178554581;178554580 | chr2:179419309;179419308;179419307 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs773486662 | 0.483 | 0.852 | N | 0.251 | 0.251 | 0.241664281697 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs773486662 | 0.483 | 0.852 | N | 0.251 | 0.251 | 0.241664281697 | gnomAD-4.0.0 | 2.0525E-06 | None | None | None | None | I | None | 5.97443E-05 | 0 | None | 0 | 2.52016E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs773486662 | 0.044 | 0.31 | N | 0.147 | 0.151 | 0.247872288689 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs773486662 | 0.044 | 0.31 | N | 0.147 | 0.151 | 0.247872288689 | gnomAD-4.0.0 | 6.84166E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1445 | likely_benign | 0.156 | benign | -0.679 | Destabilizing | 0.826 | D | 0.3 | neutral | N | 0.417258589 | None | None | I |
E/C | 0.8385 | likely_pathogenic | 0.8342 | pathogenic | -0.522 | Destabilizing | 0.999 | D | 0.268 | neutral | None | None | None | None | I |
E/D | 0.1346 | likely_benign | 0.1381 | benign | -0.709 | Destabilizing | 0.92 | D | 0.261 | neutral | N | 0.430841174 | None | None | I |
E/F | 0.8143 | likely_pathogenic | 0.8324 | pathogenic | -0.157 | Destabilizing | 0.982 | D | 0.293 | neutral | None | None | None | None | I |
E/G | 0.1471 | likely_benign | 0.156 | benign | -0.967 | Destabilizing | 0.959 | D | 0.333 | neutral | N | 0.417143945 | None | None | I |
E/H | 0.4391 | ambiguous | 0.454 | ambiguous | -0.038 | Destabilizing | 0.991 | D | 0.333 | neutral | None | None | None | None | I |
E/I | 0.4193 | ambiguous | 0.4372 | ambiguous | 0.088 | Stabilizing | 0.884 | D | 0.314 | neutral | None | None | None | None | I |
E/K | 0.1205 | likely_benign | 0.132 | benign | -0.408 | Destabilizing | 0.852 | D | 0.251 | neutral | N | 0.391112137 | None | None | I |
E/L | 0.3778 | ambiguous | 0.3953 | ambiguous | 0.088 | Stabilizing | 0.046 | N | 0.241 | neutral | None | None | None | None | I |
E/M | 0.4777 | ambiguous | 0.4942 | ambiguous | 0.175 | Stabilizing | 0.982 | D | 0.276 | neutral | None | None | None | None | I |
E/N | 0.2451 | likely_benign | 0.258 | benign | -0.816 | Destabilizing | 0.991 | D | 0.295 | neutral | None | None | None | None | I |
E/P | 0.3018 | likely_benign | 0.3173 | benign | -0.147 | Destabilizing | 0.997 | D | 0.325 | neutral | None | None | None | None | I |
E/Q | 0.1221 | likely_benign | 0.1308 | benign | -0.717 | Destabilizing | 0.31 | N | 0.147 | neutral | N | 0.381087145 | None | None | I |
E/R | 0.219 | likely_benign | 0.2288 | benign | 0.023 | Stabilizing | 0.939 | D | 0.303 | neutral | None | None | None | None | I |
E/S | 0.1858 | likely_benign | 0.1923 | benign | -1.05 | Destabilizing | 0.939 | D | 0.23 | neutral | None | None | None | None | I |
E/T | 0.1928 | likely_benign | 0.205 | benign | -0.816 | Destabilizing | 0.939 | D | 0.303 | neutral | None | None | None | None | I |
E/V | 0.2313 | likely_benign | 0.2442 | benign | -0.147 | Destabilizing | 0.061 | N | 0.153 | neutral | N | 0.430187814 | None | None | I |
E/W | 0.8935 | likely_pathogenic | 0.8994 | pathogenic | 0.093 | Stabilizing | 0.999 | D | 0.298 | neutral | None | None | None | None | I |
E/Y | 0.685 | likely_pathogenic | 0.6973 | pathogenic | 0.08 | Stabilizing | 0.997 | D | 0.297 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.