Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29591 | 88996;88997;88998 | chr2:178554576;178554575;178554574 | chr2:179419303;179419302;179419301 |
N2AB | 27950 | 84073;84074;84075 | chr2:178554576;178554575;178554574 | chr2:179419303;179419302;179419301 |
N2A | 27023 | 81292;81293;81294 | chr2:178554576;178554575;178554574 | chr2:179419303;179419302;179419301 |
N2B | 20526 | 61801;61802;61803 | chr2:178554576;178554575;178554574 | chr2:179419303;179419302;179419301 |
Novex-1 | 20651 | 62176;62177;62178 | chr2:178554576;178554575;178554574 | chr2:179419303;179419302;179419301 |
Novex-2 | 20718 | 62377;62378;62379 | chr2:178554576;178554575;178554574 | chr2:179419303;179419302;179419301 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.004 | N | 0.5 | 0.353 | 0.62347134366 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.432 | ambiguous | 0.469 | ambiguous | -1.23 | Destabilizing | 0.25 | N | 0.444 | neutral | None | None | None | None | N |
C/D | 0.6813 | likely_pathogenic | 0.726 | pathogenic | -1.155 | Destabilizing | 0.85 | D | 0.621 | neutral | None | None | None | None | N |
C/E | 0.746 | likely_pathogenic | 0.7922 | pathogenic | -0.95 | Destabilizing | 0.85 | D | 0.619 | neutral | None | None | None | None | N |
C/F | 0.4911 | ambiguous | 0.5328 | ambiguous | -0.814 | Destabilizing | 0.681 | D | 0.589 | neutral | N | 0.465778788 | None | None | N |
C/G | 0.1689 | likely_benign | 0.1999 | benign | -1.548 | Destabilizing | 0.379 | N | 0.576 | neutral | N | 0.469248282 | None | None | N |
C/H | 0.5636 | ambiguous | 0.637 | pathogenic | -1.533 | Destabilizing | 0.85 | D | 0.676 | prob.neutral | None | None | None | None | N |
C/I | 0.7519 | likely_pathogenic | 0.7684 | pathogenic | -0.378 | Destabilizing | 0.85 | D | 0.508 | neutral | None | None | None | None | N |
C/K | 0.7009 | likely_pathogenic | 0.7603 | pathogenic | -0.67 | Destabilizing | 0.85 | D | 0.614 | neutral | None | None | None | None | N |
C/L | 0.5056 | ambiguous | 0.5111 | ambiguous | -0.378 | Destabilizing | 0.447 | N | 0.471 | neutral | None | None | None | None | N |
C/M | 0.6396 | likely_pathogenic | 0.6549 | pathogenic | 0.522 | Stabilizing | 0.992 | D | 0.552 | neutral | None | None | None | None | N |
C/N | 0.3058 | likely_benign | 0.3321 | benign | -1.358 | Destabilizing | 0.85 | D | 0.637 | neutral | None | None | None | None | N |
C/P | 0.6345 | likely_pathogenic | 0.6578 | pathogenic | -0.641 | Destabilizing | 0.92 | D | 0.655 | neutral | None | None | None | None | N |
C/Q | 0.5673 | likely_pathogenic | 0.6536 | pathogenic | -0.979 | Destabilizing | 0.92 | D | 0.67 | neutral | None | None | None | None | N |
C/R | 0.4109 | ambiguous | 0.502 | ambiguous | -0.892 | Destabilizing | 0.81 | D | 0.653 | neutral | N | 0.492212133 | None | None | N |
C/S | 0.3064 | likely_benign | 0.3668 | ambiguous | -1.642 | Destabilizing | 0.016 | N | 0.396 | neutral | N | 0.503775921 | None | None | N |
C/T | 0.3497 | ambiguous | 0.3559 | ambiguous | -1.261 | Destabilizing | 0.447 | N | 0.452 | neutral | None | None | None | None | N |
C/V | 0.6224 | likely_pathogenic | 0.635 | pathogenic | -0.641 | Destabilizing | 0.617 | D | 0.453 | neutral | None | None | None | None | N |
C/W | 0.752 | likely_pathogenic | 0.8094 | pathogenic | -1.118 | Destabilizing | 0.97 | D | 0.64 | neutral | N | 0.496253307 | None | None | N |
C/Y | 0.4472 | ambiguous | 0.4906 | ambiguous | -0.902 | Destabilizing | 0.004 | N | 0.5 | neutral | N | 0.468487813 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.