Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29595 | 89008;89009;89010 | chr2:178554564;178554563;178554562 | chr2:179419291;179419290;179419289 |
N2AB | 27954 | 84085;84086;84087 | chr2:178554564;178554563;178554562 | chr2:179419291;179419290;179419289 |
N2A | 27027 | 81304;81305;81306 | chr2:178554564;178554563;178554562 | chr2:179419291;179419290;179419289 |
N2B | 20530 | 61813;61814;61815 | chr2:178554564;178554563;178554562 | chr2:179419291;179419290;179419289 |
Novex-1 | 20655 | 62188;62189;62190 | chr2:178554564;178554563;178554562 | chr2:179419291;179419290;179419289 |
Novex-2 | 20722 | 62389;62390;62391 | chr2:178554564;178554563;178554562 | chr2:179419291;179419290;179419289 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1575546136 | None | 0.995 | N | 0.782 | 0.325 | 0.417081434665 | gnomAD-4.0.0 | 1.59107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77485E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0701 | likely_benign | 0.0753 | benign | -0.888 | Destabilizing | 0.64 | D | 0.682 | prob.neutral | N | 0.347051929 | None | None | N |
T/C | 0.3659 | ambiguous | 0.4107 | ambiguous | -0.546 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
T/D | 0.8733 | likely_pathogenic | 0.8827 | pathogenic | -0.284 | Destabilizing | 0.996 | D | 0.835 | deleterious | None | None | None | None | N |
T/E | 0.7984 | likely_pathogenic | 0.8033 | pathogenic | -0.097 | Destabilizing | 0.988 | D | 0.818 | deleterious | None | None | None | None | N |
T/F | 0.5763 | likely_pathogenic | 0.6212 | pathogenic | -0.809 | Destabilizing | 0.988 | D | 0.845 | deleterious | None | None | None | None | N |
T/G | 0.4505 | ambiguous | 0.4823 | ambiguous | -1.278 | Destabilizing | 0.959 | D | 0.795 | deleterious | None | None | None | None | N |
T/H | 0.6571 | likely_pathogenic | 0.6776 | pathogenic | -1.268 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
T/I | 0.2014 | likely_benign | 0.2315 | benign | 0.121 | Stabilizing | 0.64 | D | 0.754 | deleterious | N | 0.362805241 | None | None | N |
T/K | 0.7923 | likely_pathogenic | 0.7796 | pathogenic | 0.031 | Stabilizing | 0.988 | D | 0.819 | deleterious | None | None | None | None | N |
T/L | 0.1697 | likely_benign | 0.1804 | benign | 0.121 | Stabilizing | 0.702 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/M | 0.1221 | likely_benign | 0.1315 | benign | -0.012 | Destabilizing | 0.988 | D | 0.795 | deleterious | None | None | None | None | N |
T/N | 0.3858 | ambiguous | 0.4151 | ambiguous | -0.615 | Destabilizing | 0.995 | D | 0.782 | deleterious | N | 0.490332195 | None | None | N |
T/P | 0.5272 | ambiguous | 0.5475 | ambiguous | -0.184 | Destabilizing | 0.995 | D | 0.837 | deleterious | N | 0.452891315 | None | None | N |
T/Q | 0.6382 | likely_pathogenic | 0.6474 | pathogenic | -0.371 | Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
T/R | 0.7424 | likely_pathogenic | 0.7276 | pathogenic | -0.216 | Destabilizing | 0.996 | D | 0.821 | deleterious | None | None | None | None | N |
T/S | 0.1799 | likely_benign | 0.1989 | benign | -1.012 | Destabilizing | 0.946 | D | 0.728 | prob.delet. | N | 0.45237124 | None | None | N |
T/V | 0.1201 | likely_benign | 0.1337 | benign | -0.184 | Destabilizing | 0.015 | N | 0.315 | neutral | None | None | None | None | N |
T/W | 0.9254 | likely_pathogenic | 0.9372 | pathogenic | -0.859 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
T/Y | 0.6963 | likely_pathogenic | 0.7221 | pathogenic | -0.462 | Destabilizing | 0.996 | D | 0.844 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.