Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29598 | 89017;89018;89019 | chr2:178554555;178554554;178554553 | chr2:179419282;179419281;179419280 |
N2AB | 27957 | 84094;84095;84096 | chr2:178554555;178554554;178554553 | chr2:179419282;179419281;179419280 |
N2A | 27030 | 81313;81314;81315 | chr2:178554555;178554554;178554553 | chr2:179419282;179419281;179419280 |
N2B | 20533 | 61822;61823;61824 | chr2:178554555;178554554;178554553 | chr2:179419282;179419281;179419280 |
Novex-1 | 20658 | 62197;62198;62199 | chr2:178554555;178554554;178554553 | chr2:179419282;179419281;179419280 |
Novex-2 | 20725 | 62398;62399;62400 | chr2:178554555;178554554;178554553 | chr2:179419282;179419281;179419280 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.301 | N | 0.708 | 0.406 | 0.742855381746 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8854 | likely_pathogenic | 0.901 | pathogenic | -2.435 | Highly Destabilizing | 0.055 | N | 0.637 | neutral | None | None | None | None | N |
I/C | 0.8995 | likely_pathogenic | 0.9144 | pathogenic | -1.678 | Destabilizing | 0.859 | D | 0.755 | deleterious | None | None | None | None | N |
I/D | 0.9963 | likely_pathogenic | 0.9961 | pathogenic | -2.149 | Highly Destabilizing | 0.859 | D | 0.796 | deleterious | None | None | None | None | N |
I/E | 0.9907 | likely_pathogenic | 0.9908 | pathogenic | -2.034 | Highly Destabilizing | 0.667 | D | 0.786 | deleterious | None | None | None | None | N |
I/F | 0.5906 | likely_pathogenic | 0.6268 | pathogenic | -1.591 | Destabilizing | 0.096 | N | 0.649 | neutral | N | 0.463108309 | None | None | N |
I/G | 0.9798 | likely_pathogenic | 0.9825 | pathogenic | -2.897 | Highly Destabilizing | 0.364 | N | 0.77 | deleterious | None | None | None | None | N |
I/H | 0.9803 | likely_pathogenic | 0.9818 | pathogenic | -2.095 | Highly Destabilizing | 0.958 | D | 0.813 | deleterious | None | None | None | None | N |
I/K | 0.983 | likely_pathogenic | 0.9826 | pathogenic | -1.829 | Destabilizing | 0.364 | N | 0.768 | deleterious | None | None | None | None | N |
I/L | 0.0867 | likely_benign | 0.1193 | benign | -1.156 | Destabilizing | None | N | 0.313 | neutral | N | 0.213346632 | None | None | N |
I/M | 0.1696 | likely_benign | 0.194 | benign | -0.94 | Destabilizing | 0.427 | N | 0.645 | neutral | N | 0.408697821 | None | None | N |
I/N | 0.929 | likely_pathogenic | 0.9224 | pathogenic | -1.851 | Destabilizing | 0.822 | D | 0.807 | deleterious | N | 0.482387503 | None | None | N |
I/P | 0.9812 | likely_pathogenic | 0.9839 | pathogenic | -1.557 | Destabilizing | 0.859 | D | 0.802 | deleterious | None | None | None | None | N |
I/Q | 0.9747 | likely_pathogenic | 0.9754 | pathogenic | -1.9 | Destabilizing | 0.859 | D | 0.807 | deleterious | None | None | None | None | N |
I/R | 0.9757 | likely_pathogenic | 0.9763 | pathogenic | -1.283 | Destabilizing | 0.667 | D | 0.799 | deleterious | None | None | None | None | N |
I/S | 0.9456 | likely_pathogenic | 0.9454 | pathogenic | -2.587 | Highly Destabilizing | 0.301 | N | 0.708 | prob.delet. | N | 0.482214144 | None | None | N |
I/T | 0.8738 | likely_pathogenic | 0.8859 | pathogenic | -2.335 | Highly Destabilizing | 0.175 | N | 0.682 | prob.neutral | N | 0.452584671 | None | None | N |
I/V | 0.125 | likely_benign | 0.1394 | benign | -1.557 | Destabilizing | None | N | 0.29 | neutral | N | 0.386706395 | None | None | N |
I/W | 0.9825 | likely_pathogenic | 0.9856 | pathogenic | -1.787 | Destabilizing | 0.958 | D | 0.807 | deleterious | None | None | None | None | N |
I/Y | 0.9335 | likely_pathogenic | 0.9352 | pathogenic | -1.565 | Destabilizing | 0.667 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.