Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29614 | 89065;89066;89067 | chr2:178554507;178554506;178554505 | chr2:179419234;179419233;179419232 |
N2AB | 27973 | 84142;84143;84144 | chr2:178554507;178554506;178554505 | chr2:179419234;179419233;179419232 |
N2A | 27046 | 81361;81362;81363 | chr2:178554507;178554506;178554505 | chr2:179419234;179419233;179419232 |
N2B | 20549 | 61870;61871;61872 | chr2:178554507;178554506;178554505 | chr2:179419234;179419233;179419232 |
Novex-1 | 20674 | 62245;62246;62247 | chr2:178554507;178554506;178554505 | chr2:179419234;179419233;179419232 |
Novex-2 | 20741 | 62446;62447;62448 | chr2:178554507;178554506;178554505 | chr2:179419234;179419233;179419232 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs770430100 | 0.319 | 0.999 | N | 0.623 | 0.32 | 0.507987536778 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
Y/C | rs770430100 | 0.319 | 0.999 | N | 0.623 | 0.32 | 0.507987536778 | gnomAD-4.0.0 | 1.59249E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85897E-06 | 0 | 0 |
Y/H | None | None | 0.059 | N | 0.297 | 0.182 | 0.247872288689 | gnomAD-4.0.0 | 1.5924E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85887E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8869 | likely_pathogenic | 0.9045 | pathogenic | -0.526 | Destabilizing | 0.919 | D | 0.588 | neutral | None | None | None | None | I |
Y/C | 0.433 | ambiguous | 0.5192 | ambiguous | 0.181 | Stabilizing | 0.999 | D | 0.623 | neutral | N | 0.48925476 | None | None | I |
Y/D | 0.862 | likely_pathogenic | 0.8603 | pathogenic | 0.839 | Stabilizing | 0.938 | D | 0.565 | neutral | N | 0.473758187 | None | None | I |
Y/E | 0.9528 | likely_pathogenic | 0.9529 | pathogenic | 0.814 | Stabilizing | 0.976 | D | 0.561 | neutral | None | None | None | None | I |
Y/F | 0.0958 | likely_benign | 0.0927 | benign | -0.288 | Destabilizing | 0.026 | N | 0.329 | neutral | N | 0.469148847 | None | None | I |
Y/G | 0.8954 | likely_pathogenic | 0.9098 | pathogenic | -0.703 | Destabilizing | 0.919 | D | 0.595 | neutral | None | None | None | None | I |
Y/H | 0.5054 | ambiguous | 0.4944 | ambiguous | 0.282 | Stabilizing | 0.059 | N | 0.297 | neutral | N | 0.513977059 | None | None | I |
Y/I | 0.7035 | likely_pathogenic | 0.7174 | pathogenic | -0.093 | Destabilizing | 0.952 | D | 0.528 | neutral | None | None | None | None | I |
Y/K | 0.9581 | likely_pathogenic | 0.9584 | pathogenic | 0.29 | Stabilizing | 0.976 | D | 0.559 | neutral | None | None | None | None | I |
Y/L | 0.7559 | likely_pathogenic | 0.777 | pathogenic | -0.093 | Destabilizing | 0.851 | D | 0.538 | neutral | None | None | None | None | I |
Y/M | 0.7948 | likely_pathogenic | 0.8005 | pathogenic | -0.025 | Destabilizing | 0.997 | D | 0.537 | neutral | None | None | None | None | I |
Y/N | 0.596 | likely_pathogenic | 0.5967 | pathogenic | 0.098 | Stabilizing | 0.059 | N | 0.441 | neutral | N | 0.509512602 | None | None | I |
Y/P | 0.9882 | likely_pathogenic | 0.9896 | pathogenic | -0.218 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | I |
Y/Q | 0.912 | likely_pathogenic | 0.9172 | pathogenic | 0.139 | Stabilizing | 0.988 | D | 0.547 | neutral | None | None | None | None | I |
Y/R | 0.9206 | likely_pathogenic | 0.9233 | pathogenic | 0.51 | Stabilizing | 0.976 | D | 0.596 | neutral | None | None | None | None | I |
Y/S | 0.7802 | likely_pathogenic | 0.8041 | pathogenic | -0.287 | Destabilizing | 0.811 | D | 0.581 | neutral | N | 0.486867816 | None | None | I |
Y/T | 0.891 | likely_pathogenic | 0.9031 | pathogenic | -0.22 | Destabilizing | 0.976 | D | 0.553 | neutral | None | None | None | None | I |
Y/V | 0.6579 | likely_pathogenic | 0.6993 | pathogenic | -0.218 | Destabilizing | 0.919 | D | 0.55 | neutral | None | None | None | None | I |
Y/W | 0.5343 | ambiguous | 0.5408 | ambiguous | -0.457 | Destabilizing | 0.999 | D | 0.455 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.