Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29616 | 89071;89072;89073 | chr2:178554501;178554500;178554499 | chr2:179419228;179419227;179419226 |
N2AB | 27975 | 84148;84149;84150 | chr2:178554501;178554500;178554499 | chr2:179419228;179419227;179419226 |
N2A | 27048 | 81367;81368;81369 | chr2:178554501;178554500;178554499 | chr2:179419228;179419227;179419226 |
N2B | 20551 | 61876;61877;61878 | chr2:178554501;178554500;178554499 | chr2:179419228;179419227;179419226 |
Novex-1 | 20676 | 62251;62252;62253 | chr2:178554501;178554500;178554499 | chr2:179419228;179419227;179419226 |
Novex-2 | 20743 | 62452;62453;62454 | chr2:178554501;178554500;178554499 | chr2:179419228;179419227;179419226 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs768798726 | None | 0.317 | N | 0.584 | 0.105 | None | gnomAD-4.0.0 | 1.59433E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88872E-05 | 0 | 0 | 0 | 0 |
I/N | None | None | 0.484 | N | 0.653 | 0.339 | 0.666472316455 | gnomAD-4.0.0 | 1.59284E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1151 | likely_benign | 0.1152 | benign | -1.509 | Destabilizing | 0.001 | N | 0.319 | neutral | None | None | None | None | N |
I/C | 0.4875 | ambiguous | 0.4985 | ambiguous | -1.011 | Destabilizing | 0.824 | D | 0.581 | neutral | None | None | None | None | N |
I/D | 0.4829 | ambiguous | 0.489 | ambiguous | -0.675 | Destabilizing | 0.555 | D | 0.652 | neutral | None | None | None | None | N |
I/E | 0.3907 | ambiguous | 0.3819 | ambiguous | -0.687 | Destabilizing | 0.555 | D | 0.63 | neutral | None | None | None | None | N |
I/F | 0.1443 | likely_benign | 0.1549 | benign | -1.04 | Destabilizing | 0.317 | N | 0.584 | neutral | N | 0.510803468 | None | None | N |
I/G | 0.4547 | ambiguous | 0.4687 | ambiguous | -1.808 | Destabilizing | 0.081 | N | 0.627 | neutral | None | None | None | None | N |
I/H | 0.414 | ambiguous | 0.442 | ambiguous | -0.851 | Destabilizing | 0.935 | D | 0.646 | neutral | None | None | None | None | N |
I/K | 0.3313 | likely_benign | 0.3431 | ambiguous | -0.903 | Destabilizing | 0.38 | N | 0.634 | neutral | None | None | None | None | N |
I/L | 0.1104 | likely_benign | 0.1118 | benign | -0.778 | Destabilizing | 0.012 | N | 0.239 | neutral | N | 0.455526188 | None | None | N |
I/M | 0.0949 | likely_benign | 0.0961 | benign | -0.688 | Destabilizing | 0.317 | N | 0.596 | neutral | N | 0.462204231 | None | None | N |
I/N | 0.2266 | likely_benign | 0.2302 | benign | -0.711 | Destabilizing | 0.484 | N | 0.653 | neutral | N | 0.509763318 | None | None | N |
I/P | 0.2986 | likely_benign | 0.3083 | benign | -0.989 | Destabilizing | 0.555 | D | 0.653 | neutral | None | None | None | None | N |
I/Q | 0.3487 | ambiguous | 0.3628 | ambiguous | -0.91 | Destabilizing | 0.555 | D | 0.653 | neutral | None | None | None | None | N |
I/R | 0.2424 | likely_benign | 0.2662 | benign | -0.28 | Destabilizing | 0.555 | D | 0.653 | neutral | None | None | None | None | N |
I/S | 0.1556 | likely_benign | 0.1612 | benign | -1.365 | Destabilizing | 0.062 | N | 0.584 | neutral | N | 0.47822969 | None | None | N |
I/T | 0.0667 | likely_benign | 0.0713 | benign | -1.257 | Destabilizing | 0.062 | N | 0.487 | neutral | N | 0.461529441 | None | None | N |
I/V | 0.0594 | likely_benign | 0.0601 | benign | -0.989 | Destabilizing | None | N | 0.197 | neutral | N | 0.415469077 | None | None | N |
I/W | 0.6902 | likely_pathogenic | 0.7292 | pathogenic | -1.02 | Destabilizing | 0.935 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/Y | 0.4535 | ambiguous | 0.4755 | ambiguous | -0.818 | Destabilizing | 0.555 | D | 0.601 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.