Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29618 | 89077;89078;89079 | chr2:178554495;178554494;178554493 | chr2:179419222;179419221;179419220 |
N2AB | 27977 | 84154;84155;84156 | chr2:178554495;178554494;178554493 | chr2:179419222;179419221;179419220 |
N2A | 27050 | 81373;81374;81375 | chr2:178554495;178554494;178554493 | chr2:179419222;179419221;179419220 |
N2B | 20553 | 61882;61883;61884 | chr2:178554495;178554494;178554493 | chr2:179419222;179419221;179419220 |
Novex-1 | 20678 | 62257;62258;62259 | chr2:178554495;178554494;178554493 | chr2:179419222;179419221;179419220 |
Novex-2 | 20745 | 62458;62459;62460 | chr2:178554495;178554494;178554493 | chr2:179419222;179419221;179419220 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs879222602 | -0.058 | 0.426 | N | 0.493 | 0.23 | None | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.99E-06 | 0 |
E/K | rs879222602 | -0.058 | 0.426 | N | 0.493 | 0.23 | None | gnomAD-4.0.0 | 1.98497E-05 | None | None | None | None | N | None | 2.98757E-05 | 0 | None | 0 | 2.52985E-05 | None | 0 | 0 | 2.33889E-05 | 0 | 1.65793E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1122 | likely_benign | 0.1214 | benign | -0.767 | Destabilizing | 0.002 | N | 0.247 | neutral | N | 0.518692232 | None | None | N |
E/C | 0.6429 | likely_pathogenic | 0.6717 | pathogenic | -0.391 | Destabilizing | 0.935 | D | 0.597 | neutral | None | None | None | None | N |
E/D | 0.0615 | likely_benign | 0.0639 | benign | -0.839 | Destabilizing | None | N | 0.073 | neutral | N | 0.456625053 | None | None | N |
E/F | 0.5271 | ambiguous | 0.5655 | pathogenic | -0.436 | Destabilizing | 0.791 | D | 0.579 | neutral | None | None | None | None | N |
E/G | 0.1546 | likely_benign | 0.1637 | benign | -1.054 | Destabilizing | 0.117 | N | 0.491 | neutral | N | 0.488801476 | None | None | N |
E/H | 0.3262 | likely_benign | 0.3572 | ambiguous | -0.545 | Destabilizing | 0.555 | D | 0.492 | neutral | None | None | None | None | N |
E/I | 0.1961 | likely_benign | 0.2079 | benign | -0.01 | Destabilizing | 0.555 | D | 0.562 | neutral | None | None | None | None | N |
E/K | 0.1235 | likely_benign | 0.1316 | benign | -0.413 | Destabilizing | 0.426 | N | 0.493 | neutral | N | 0.504320213 | None | None | N |
E/L | 0.2237 | likely_benign | 0.2398 | benign | -0.01 | Destabilizing | 0.149 | N | 0.572 | neutral | None | None | None | None | N |
E/M | 0.3069 | likely_benign | 0.3267 | benign | 0.271 | Stabilizing | 0.935 | D | 0.563 | neutral | None | None | None | None | N |
E/N | 0.1275 | likely_benign | 0.1424 | benign | -0.732 | Destabilizing | 0.081 | N | 0.523 | neutral | None | None | None | None | N |
E/P | 0.2474 | likely_benign | 0.2493 | benign | -0.242 | Destabilizing | 0.555 | D | 0.575 | neutral | None | None | None | None | N |
E/Q | 0.121 | likely_benign | 0.127 | benign | -0.669 | Destabilizing | 0.251 | N | 0.558 | neutral | N | 0.497586242 | None | None | N |
E/R | 0.2154 | likely_benign | 0.2264 | benign | -0.127 | Destabilizing | 0.38 | N | 0.523 | neutral | None | None | None | None | N |
E/S | 0.1341 | likely_benign | 0.1462 | benign | -0.973 | Destabilizing | 0.081 | N | 0.415 | neutral | None | None | None | None | N |
E/T | 0.1706 | likely_benign | 0.181 | benign | -0.749 | Destabilizing | 0.149 | N | 0.544 | neutral | None | None | None | None | N |
E/V | 0.1287 | likely_benign | 0.1363 | benign | -0.242 | Destabilizing | 0.117 | N | 0.576 | neutral | N | 0.518654947 | None | None | N |
E/W | 0.7935 | likely_pathogenic | 0.8144 | pathogenic | -0.22 | Destabilizing | 0.935 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/Y | 0.3714 | ambiguous | 0.4016 | ambiguous | -0.203 | Destabilizing | 0.791 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.