Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29619 | 89080;89081;89082 | chr2:178554492;178554491;178554490 | chr2:179419219;179419218;179419217 |
N2AB | 27978 | 84157;84158;84159 | chr2:178554492;178554491;178554490 | chr2:179419219;179419218;179419217 |
N2A | 27051 | 81376;81377;81378 | chr2:178554492;178554491;178554490 | chr2:179419219;179419218;179419217 |
N2B | 20554 | 61885;61886;61887 | chr2:178554492;178554491;178554490 | chr2:179419219;179419218;179419217 |
Novex-1 | 20679 | 62260;62261;62262 | chr2:178554492;178554491;178554490 | chr2:179419219;179419218;179419217 |
Novex-2 | 20746 | 62461;62462;62463 | chr2:178554492;178554491;178554490 | chr2:179419219;179419218;179419217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1042897248 | None | 0.331 | N | 0.691 | 0.46 | 0.489589578638 | gnomAD-4.0.0 | 6.84609E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16052E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0804 | likely_benign | 0.0726 | benign | -1.744 | Destabilizing | 0.001 | N | 0.449 | neutral | N | 0.504914859 | None | None | N |
P/C | 0.4706 | ambiguous | 0.4306 | ambiguous | -1.015 | Destabilizing | 0.909 | D | 0.758 | deleterious | None | None | None | None | N |
P/D | 0.7411 | likely_pathogenic | 0.6979 | pathogenic | -1.854 | Destabilizing | 0.396 | N | 0.604 | neutral | None | None | None | None | N |
P/E | 0.597 | likely_pathogenic | 0.5359 | ambiguous | -1.855 | Destabilizing | 0.157 | N | 0.575 | neutral | None | None | None | None | N |
P/F | 0.5413 | ambiguous | 0.5432 | ambiguous | -1.326 | Destabilizing | 0.726 | D | 0.761 | deleterious | None | None | None | None | N |
P/G | 0.3732 | ambiguous | 0.3256 | benign | -2.055 | Highly Destabilizing | 0.157 | N | 0.595 | neutral | None | None | None | None | N |
P/H | 0.394 | ambiguous | 0.3965 | ambiguous | -1.587 | Destabilizing | 0.909 | D | 0.703 | prob.neutral | None | None | None | None | N |
P/I | 0.4559 | ambiguous | 0.4028 | ambiguous | -0.975 | Destabilizing | 0.567 | D | 0.729 | prob.delet. | None | None | None | None | N |
P/K | 0.7233 | likely_pathogenic | 0.6729 | pathogenic | -1.52 | Destabilizing | 0.157 | N | 0.579 | neutral | None | None | None | None | N |
P/L | 0.3097 | likely_benign | 0.2894 | benign | -0.975 | Destabilizing | 0.331 | N | 0.691 | prob.neutral | N | 0.497738245 | None | None | N |
P/M | 0.4547 | ambiguous | 0.4204 | ambiguous | -0.689 | Destabilizing | 0.909 | D | 0.705 | prob.neutral | None | None | None | None | N |
P/N | 0.5875 | likely_pathogenic | 0.5411 | ambiguous | -1.271 | Destabilizing | 0.396 | N | 0.668 | neutral | None | None | None | None | N |
P/Q | 0.4284 | ambiguous | 0.4013 | ambiguous | -1.478 | Destabilizing | 0.497 | N | 0.635 | neutral | D | 0.522225283 | None | None | N |
P/R | 0.6123 | likely_pathogenic | 0.5788 | pathogenic | -0.909 | Destabilizing | 0.497 | N | 0.683 | prob.neutral | N | 0.503614049 | None | None | N |
P/S | 0.1629 | likely_benign | 0.1436 | benign | -1.725 | Destabilizing | 0.001 | N | 0.364 | neutral | N | 0.486724335 | None | None | N |
P/T | 0.2016 | likely_benign | 0.1757 | benign | -1.636 | Destabilizing | 0.124 | N | 0.535 | neutral | N | 0.499259182 | None | None | N |
P/V | 0.3023 | likely_benign | 0.263 | benign | -1.199 | Destabilizing | 0.396 | N | 0.633 | neutral | None | None | None | None | N |
P/W | 0.7088 | likely_pathogenic | 0.7162 | pathogenic | -1.527 | Destabilizing | 0.968 | D | 0.719 | prob.delet. | None | None | None | None | N |
P/Y | 0.534 | ambiguous | 0.5213 | ambiguous | -1.284 | Destabilizing | 0.726 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.