Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29628 | 89107;89108;89109 | chr2:178554465;178554464;178554463 | chr2:179419192;179419191;179419190 |
N2AB | 27987 | 84184;84185;84186 | chr2:178554465;178554464;178554463 | chr2:179419192;179419191;179419190 |
N2A | 27060 | 81403;81404;81405 | chr2:178554465;178554464;178554463 | chr2:179419192;179419191;179419190 |
N2B | 20563 | 61912;61913;61914 | chr2:178554465;178554464;178554463 | chr2:179419192;179419191;179419190 |
Novex-1 | 20688 | 62287;62288;62289 | chr2:178554465;178554464;178554463 | chr2:179419192;179419191;179419190 |
Novex-2 | 20755 | 62488;62489;62490 | chr2:178554465;178554464;178554463 | chr2:179419192;179419191;179419190 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1366016395 | 0.146 | 0.005 | N | 0.303 | 0.049 | 0.101711395817 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
K/R | rs1366016395 | 0.146 | 0.005 | N | 0.303 | 0.049 | 0.101711395817 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1366016395 | 0.146 | 0.005 | N | 0.303 | 0.049 | 0.101711395817 | gnomAD-4.0.0 | 3.71933E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08646E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4493 | ambiguous | 0.4116 | ambiguous | -0.139 | Destabilizing | 0.46 | N | 0.603 | neutral | None | None | None | None | N |
K/C | 0.5879 | likely_pathogenic | 0.5727 | pathogenic | -0.221 | Destabilizing | 0.986 | D | 0.868 | deleterious | None | None | None | None | N |
K/D | 0.7819 | likely_pathogenic | 0.7514 | pathogenic | 0.162 | Stabilizing | 0.749 | D | 0.735 | deleterious | None | None | None | None | N |
K/E | 0.2366 | likely_benign | 0.2112 | benign | 0.181 | Stabilizing | 0.244 | N | 0.515 | neutral | N | 0.507203015 | None | None | N |
K/F | 0.8664 | likely_pathogenic | 0.8599 | pathogenic | -0.289 | Destabilizing | 0.958 | D | 0.819 | deleterious | None | None | None | None | N |
K/G | 0.5904 | likely_pathogenic | 0.5495 | ambiguous | -0.377 | Destabilizing | 0.749 | D | 0.623 | neutral | None | None | None | None | N |
K/H | 0.3731 | ambiguous | 0.3408 | ambiguous | -0.762 | Destabilizing | 0.958 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/I | 0.458 | ambiguous | 0.4231 | ambiguous | 0.415 | Stabilizing | 0.858 | D | 0.85 | deleterious | None | None | None | None | N |
K/L | 0.5006 | ambiguous | 0.4665 | ambiguous | 0.415 | Stabilizing | 0.749 | D | 0.623 | neutral | None | None | None | None | N |
K/M | 0.3307 | likely_benign | 0.3098 | benign | 0.344 | Stabilizing | 0.981 | D | 0.723 | deleterious | N | 0.474732465 | None | None | N |
K/N | 0.6215 | likely_pathogenic | 0.5872 | pathogenic | 0.17 | Stabilizing | 0.693 | D | 0.671 | prob.neutral | N | 0.497698565 | None | None | N |
K/P | 0.9684 | likely_pathogenic | 0.9673 | pathogenic | 0.26 | Stabilizing | 0.858 | D | 0.736 | deleterious | None | None | None | None | N |
K/Q | 0.1263 | likely_benign | 0.1162 | benign | -0.036 | Destabilizing | 0.693 | D | 0.692 | prob.delet. | N | 0.478322903 | None | None | N |
K/R | 0.0733 | likely_benign | 0.0719 | benign | -0.122 | Destabilizing | 0.005 | N | 0.303 | neutral | N | 0.457830201 | None | None | N |
K/S | 0.5329 | ambiguous | 0.4953 | ambiguous | -0.407 | Destabilizing | 0.46 | N | 0.631 | neutral | None | None | None | None | N |
K/T | 0.2387 | likely_benign | 0.2096 | benign | -0.224 | Destabilizing | 0.693 | D | 0.704 | prob.delet. | N | 0.517993225 | None | None | N |
K/V | 0.3332 | likely_benign | 0.3083 | benign | 0.26 | Stabilizing | 0.749 | D | 0.783 | deleterious | None | None | None | None | N |
K/W | 0.8221 | likely_pathogenic | 0.8054 | pathogenic | -0.232 | Destabilizing | 0.986 | D | 0.874 | deleterious | None | None | None | None | N |
K/Y | 0.762 | likely_pathogenic | 0.7443 | pathogenic | 0.116 | Stabilizing | 0.858 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.