Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29629 | 89110;89111;89112 | chr2:178554462;178554461;178554460 | chr2:179419189;179419188;179419187 |
N2AB | 27988 | 84187;84188;84189 | chr2:178554462;178554461;178554460 | chr2:179419189;179419188;179419187 |
N2A | 27061 | 81406;81407;81408 | chr2:178554462;178554461;178554460 | chr2:179419189;179419188;179419187 |
N2B | 20564 | 61915;61916;61917 | chr2:178554462;178554461;178554460 | chr2:179419189;179419188;179419187 |
Novex-1 | 20689 | 62290;62291;62292 | chr2:178554462;178554461;178554460 | chr2:179419189;179419188;179419187 |
Novex-2 | 20756 | 62491;62492;62493 | chr2:178554462;178554461;178554460 | chr2:179419189;179419188;179419187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs759136146 | None | 1.0 | N | 0.757 | 0.235 | 0.104622674875 | gnomAD-4.0.0 | 4.79221E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29798E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.827 | likely_pathogenic | 0.8506 | pathogenic | -0.215 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
N/C | 0.853 | likely_pathogenic | 0.8694 | pathogenic | 0.409 | Stabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
N/D | 0.3074 | likely_benign | 0.3022 | benign | 0.085 | Stabilizing | 0.997 | D | 0.71 | prob.delet. | N | 0.38604746 | None | None | N |
N/E | 0.9048 | likely_pathogenic | 0.9121 | pathogenic | 0.036 | Stabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
N/F | 0.9143 | likely_pathogenic | 0.9264 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
N/G | 0.8592 | likely_pathogenic | 0.8744 | pathogenic | -0.363 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | N |
N/H | 0.4618 | ambiguous | 0.4591 | ambiguous | -0.44 | Destabilizing | 0.999 | D | 0.801 | deleterious | N | 0.501775766 | None | None | N |
N/I | 0.7734 | likely_pathogenic | 0.7884 | pathogenic | 0.083 | Stabilizing | 0.999 | D | 0.786 | deleterious | N | 0.463625968 | None | None | N |
N/K | 0.9385 | likely_pathogenic | 0.9424 | pathogenic | 0.132 | Stabilizing | 1.0 | D | 0.757 | deleterious | N | 0.514262274 | None | None | N |
N/L | 0.7562 | likely_pathogenic | 0.7652 | pathogenic | 0.083 | Stabilizing | 0.999 | D | 0.729 | deleterious | None | None | None | None | N |
N/M | 0.7709 | likely_pathogenic | 0.8055 | pathogenic | 0.399 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
N/P | 0.8813 | likely_pathogenic | 0.9025 | pathogenic | 0.009 | Stabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
N/Q | 0.8971 | likely_pathogenic | 0.9051 | pathogenic | -0.258 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
N/R | 0.9519 | likely_pathogenic | 0.9571 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
N/S | 0.3736 | ambiguous | 0.3684 | ambiguous | -0.01 | Destabilizing | 0.997 | D | 0.635 | neutral | N | 0.483016647 | None | None | N |
N/T | 0.6064 | likely_pathogenic | 0.6192 | pathogenic | 0.071 | Stabilizing | 0.997 | D | 0.749 | deleterious | N | 0.45664283 | None | None | N |
N/V | 0.7918 | likely_pathogenic | 0.8113 | pathogenic | 0.009 | Stabilizing | 0.999 | D | 0.734 | deleterious | None | None | None | None | N |
N/W | 0.967 | likely_pathogenic | 0.9697 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
N/Y | 0.5058 | ambiguous | 0.5284 | ambiguous | -0.415 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.484806158 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.