Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29633 | 89122;89123;89124 | chr2:178554214;178554213;178554212 | chr2:179418941;179418940;179418939 |
N2AB | 27992 | 84199;84200;84201 | chr2:178554214;178554213;178554212 | chr2:179418941;179418940;179418939 |
N2A | 27065 | 81418;81419;81420 | chr2:178554214;178554213;178554212 | chr2:179418941;179418940;179418939 |
N2B | 20568 | 61927;61928;61929 | chr2:178554214;178554213;178554212 | chr2:179418941;179418940;179418939 |
Novex-1 | 20693 | 62302;62303;62304 | chr2:178554214;178554213;178554212 | chr2:179418941;179418940;179418939 |
Novex-2 | 20760 | 62503;62504;62505 | chr2:178554214;178554213;178554212 | chr2:179418941;179418940;179418939 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.002 | N | 0.055 | 0.08 | 0.107399877778 | gnomAD-4.0.0 | 1.67725E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.95919E-06 | 0 | 0 |
T/K | None | -0.109 | 0.651 | N | 0.485 | 0.28 | 0.34854441366 | gnomAD-2.1.1 | 4.59E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.9E-06 | 0 |
T/K | None | -0.109 | 0.651 | N | 0.485 | 0.28 | 0.34854441366 | gnomAD-4.0.0 | 1.67545E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.16877E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0873 | likely_benign | 0.0877 | benign | -0.606 | Destabilizing | 0.002 | N | 0.055 | neutral | N | 0.403630357 | None | None | I |
T/C | 0.3249 | likely_benign | 0.3388 | benign | -0.261 | Destabilizing | 0.995 | D | 0.398 | neutral | None | None | None | None | I |
T/D | 0.6277 | likely_pathogenic | 0.6279 | pathogenic | -0.167 | Destabilizing | 0.834 | D | 0.575 | neutral | None | None | None | None | I |
T/E | 0.4214 | ambiguous | 0.4052 | ambiguous | -0.254 | Destabilizing | 0.712 | D | 0.524 | neutral | None | None | None | None | I |
T/F | 0.3465 | ambiguous | 0.3643 | ambiguous | -1.185 | Destabilizing | 0.946 | D | 0.523 | neutral | None | None | None | None | I |
T/G | 0.4517 | ambiguous | 0.4839 | ambiguous | -0.71 | Destabilizing | 0.338 | N | 0.415 | neutral | None | None | None | None | I |
T/H | 0.3408 | ambiguous | 0.3514 | ambiguous | -1.131 | Destabilizing | 0.018 | N | 0.345 | neutral | None | None | None | None | I |
T/I | 0.1134 | likely_benign | 0.1108 | benign | -0.444 | Destabilizing | 0.868 | D | 0.545 | neutral | N | 0.421506828 | None | None | I |
T/K | 0.2664 | likely_benign | 0.2525 | benign | -0.372 | Destabilizing | 0.651 | D | 0.485 | neutral | N | 0.396821815 | None | None | I |
T/L | 0.0819 | likely_benign | 0.0791 | benign | -0.444 | Destabilizing | 0.712 | D | 0.455 | neutral | None | None | None | None | I |
T/M | 0.0806 | likely_benign | 0.0773 | benign | 0.052 | Stabilizing | 0.982 | D | 0.409 | neutral | None | None | None | None | I |
T/N | 0.1919 | likely_benign | 0.1935 | benign | -0.136 | Destabilizing | 0.712 | D | 0.379 | neutral | None | None | None | None | I |
T/P | 0.0727 | likely_benign | 0.0716 | benign | -0.473 | Destabilizing | 0.002 | N | 0.061 | neutral | N | 0.32357485 | None | None | I |
T/Q | 0.256 | likely_benign | 0.2488 | benign | -0.506 | Destabilizing | 0.946 | D | 0.547 | neutral | None | None | None | None | I |
T/R | 0.2659 | likely_benign | 0.2549 | benign | -0.051 | Destabilizing | 0.868 | D | 0.546 | neutral | N | 0.426259287 | None | None | I |
T/S | 0.1615 | likely_benign | 0.1655 | benign | -0.345 | Destabilizing | 0.278 | N | 0.367 | neutral | N | 0.46522032 | None | None | I |
T/V | 0.0907 | likely_benign | 0.0882 | benign | -0.473 | Destabilizing | 0.553 | D | 0.299 | neutral | None | None | None | None | I |
T/W | 0.7646 | likely_pathogenic | 0.7709 | pathogenic | -1.113 | Destabilizing | 0.995 | D | 0.536 | neutral | None | None | None | None | I |
T/Y | 0.4016 | ambiguous | 0.3971 | ambiguous | -0.846 | Destabilizing | 0.897 | D | 0.489 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.