Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29641 | 89146;89147;89148 | chr2:178554190;178554189;178554188 | chr2:179418917;179418916;179418915 |
N2AB | 28000 | 84223;84224;84225 | chr2:178554190;178554189;178554188 | chr2:179418917;179418916;179418915 |
N2A | 27073 | 81442;81443;81444 | chr2:178554190;178554189;178554188 | chr2:179418917;179418916;179418915 |
N2B | 20576 | 61951;61952;61953 | chr2:178554190;178554189;178554188 | chr2:179418917;179418916;179418915 |
Novex-1 | 20701 | 62326;62327;62328 | chr2:178554190;178554189;178554188 | chr2:179418917;179418916;179418915 |
Novex-2 | 20768 | 62527;62528;62529 | chr2:178554190;178554189;178554188 | chr2:179418917;179418916;179418915 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs772380405 | 0.103 | 0.122 | N | 0.235 | 0.166 | 0.269558022972 | gnomAD-2.1.1 | 1.26E-05 | None | None | None | None | N | None | 0 | 9.09E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs772380405 | 0.103 | 0.122 | N | 0.235 | 0.166 | 0.269558022972 | gnomAD-4.0.0 | 2.75391E-06 | None | None | None | None | N | None | 0 | 6.92841E-05 | None | 0 | 0 | None | 0 | 0 | 9.02389E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1768 | likely_benign | 0.1867 | benign | -0.66 | Destabilizing | 0.961 | D | 0.579 | neutral | N | 0.515555927 | None | None | N |
E/C | 0.8285 | likely_pathogenic | 0.8271 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/D | 0.1587 | likely_benign | 0.1804 | benign | -0.678 | Destabilizing | 0.961 | D | 0.541 | neutral | N | 0.467254181 | None | None | N |
E/F | 0.7611 | likely_pathogenic | 0.7778 | pathogenic | -0.164 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
E/G | 0.2929 | likely_benign | 0.3235 | benign | -0.956 | Destabilizing | 0.98 | D | 0.622 | neutral | N | 0.474179942 | None | None | N |
E/H | 0.4549 | ambiguous | 0.482 | ambiguous | -0.145 | Destabilizing | 0.996 | D | 0.627 | neutral | None | None | None | None | N |
E/I | 0.3129 | likely_benign | 0.3199 | benign | 0.126 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
E/K | 0.1661 | likely_benign | 0.1881 | benign | -0.137 | Destabilizing | 0.122 | N | 0.235 | neutral | N | 0.459430498 | None | None | N |
E/L | 0.4173 | ambiguous | 0.4299 | ambiguous | 0.126 | Stabilizing | 0.97 | D | 0.66 | neutral | None | None | None | None | N |
E/M | 0.4307 | ambiguous | 0.4454 | ambiguous | 0.295 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/N | 0.283 | likely_benign | 0.3099 | benign | -0.628 | Destabilizing | 0.985 | D | 0.559 | neutral | None | None | None | None | N |
E/P | 0.9523 | likely_pathogenic | 0.9575 | pathogenic | -0.115 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
E/Q | 0.1414 | likely_benign | 0.1488 | benign | -0.528 | Destabilizing | 0.489 | N | 0.397 | neutral | N | 0.48121128 | None | None | N |
E/R | 0.2874 | likely_benign | 0.3141 | benign | 0.183 | Stabilizing | 0.942 | D | 0.532 | neutral | None | None | None | None | N |
E/S | 0.2123 | likely_benign | 0.2302 | benign | -0.837 | Destabilizing | 0.97 | D | 0.54 | neutral | None | None | None | None | N |
E/T | 0.1934 | likely_benign | 0.1991 | benign | -0.59 | Destabilizing | 0.985 | D | 0.606 | neutral | None | None | None | None | N |
E/V | 0.1794 | likely_benign | 0.1815 | benign | -0.115 | Destabilizing | 0.994 | D | 0.642 | neutral | N | 0.472015793 | None | None | N |
E/W | 0.9164 | likely_pathogenic | 0.926 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/Y | 0.6602 | likely_pathogenic | 0.6867 | pathogenic | 0.098 | Stabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.