Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29648 | 89167;89168;89169 | chr2:178554169;178554168;178554167 | chr2:179418896;179418895;179418894 |
N2AB | 28007 | 84244;84245;84246 | chr2:178554169;178554168;178554167 | chr2:179418896;179418895;179418894 |
N2A | 27080 | 81463;81464;81465 | chr2:178554169;178554168;178554167 | chr2:179418896;179418895;179418894 |
N2B | 20583 | 61972;61973;61974 | chr2:178554169;178554168;178554167 | chr2:179418896;179418895;179418894 |
Novex-1 | 20708 | 62347;62348;62349 | chr2:178554169;178554168;178554167 | chr2:179418896;179418895;179418894 |
Novex-2 | 20775 | 62548;62549;62550 | chr2:178554169;178554168;178554167 | chr2:179418896;179418895;179418894 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.934 | N | 0.453 | 0.26 | 0.599314493506 | gnomAD-4.0.0 | 1.60077E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2289 | likely_benign | 0.2503 | benign | -0.64 | Destabilizing | 0.525 | D | 0.372 | neutral | None | None | None | None | N |
N/C | 0.2658 | likely_benign | 0.3028 | benign | 0.04 | Stabilizing | 0.998 | D | 0.397 | neutral | None | None | None | None | N |
N/D | 0.1148 | likely_benign | 0.1203 | benign | -1.008 | Destabilizing | 0.625 | D | 0.295 | neutral | N | 0.403406644 | None | None | N |
N/E | 0.3356 | likely_benign | 0.3524 | ambiguous | -1.009 | Destabilizing | 0.525 | D | 0.271 | neutral | None | None | None | None | N |
N/F | 0.4603 | ambiguous | 0.4963 | ambiguous | -1.01 | Destabilizing | 0.974 | D | 0.431 | neutral | None | None | None | None | N |
N/G | 0.2491 | likely_benign | 0.2699 | benign | -0.836 | Destabilizing | 0.688 | D | 0.313 | neutral | None | None | None | None | N |
N/H | 0.1098 | likely_benign | 0.1173 | benign | -0.894 | Destabilizing | 0.028 | N | 0.193 | neutral | N | 0.502282772 | None | None | N |
N/I | 0.2949 | likely_benign | 0.3333 | benign | -0.191 | Destabilizing | 0.934 | D | 0.453 | neutral | N | 0.480082198 | None | None | N |
N/K | 0.361 | ambiguous | 0.3806 | ambiguous | -0.052 | Destabilizing | 0.454 | N | 0.263 | neutral | N | 0.467965424 | None | None | N |
N/L | 0.2731 | likely_benign | 0.3016 | benign | -0.191 | Destabilizing | 0.728 | D | 0.445 | neutral | None | None | None | None | N |
N/M | 0.2996 | likely_benign | 0.3326 | benign | 0.523 | Stabilizing | 0.974 | D | 0.369 | neutral | None | None | None | None | N |
N/P | 0.8755 | likely_pathogenic | 0.9046 | pathogenic | -0.316 | Destabilizing | 0.974 | D | 0.434 | neutral | None | None | None | None | N |
N/Q | 0.2886 | likely_benign | 0.3096 | benign | -0.922 | Destabilizing | 0.067 | N | 0.192 | neutral | None | None | None | None | N |
N/R | 0.421 | ambiguous | 0.4388 | ambiguous | 0.161 | Stabilizing | 0.728 | D | 0.341 | neutral | None | None | None | None | N |
N/S | 0.0916 | likely_benign | 0.0941 | benign | -0.501 | Destabilizing | 0.062 | N | 0.059 | neutral | N | 0.441423528 | None | None | N |
N/T | 0.1082 | likely_benign | 0.1138 | benign | -0.361 | Destabilizing | 0.051 | N | 0.099 | neutral | N | 0.43534013 | None | None | N |
N/V | 0.2919 | likely_benign | 0.3198 | benign | -0.316 | Destabilizing | 0.728 | D | 0.481 | neutral | None | None | None | None | N |
N/W | 0.7424 | likely_pathogenic | 0.7503 | pathogenic | -0.875 | Destabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | N |
N/Y | 0.1498 | likely_benign | 0.1639 | benign | -0.586 | Destabilizing | 0.934 | D | 0.436 | neutral | N | 0.483703049 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.