Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29650 | 89173;89174;89175 | chr2:178554163;178554162;178554161 | chr2:179418890;179418889;179418888 |
N2AB | 28009 | 84250;84251;84252 | chr2:178554163;178554162;178554161 | chr2:179418890;179418889;179418888 |
N2A | 27082 | 81469;81470;81471 | chr2:178554163;178554162;178554161 | chr2:179418890;179418889;179418888 |
N2B | 20585 | 61978;61979;61980 | chr2:178554163;178554162;178554161 | chr2:179418890;179418889;179418888 |
Novex-1 | 20710 | 62353;62354;62355 | chr2:178554163;178554162;178554161 | chr2:179418890;179418889;179418888 |
Novex-2 | 20777 | 62554;62555;62556 | chr2:178554163;178554162;178554161 | chr2:179418890;179418889;179418888 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs944381912 | 0.132 | 0.985 | N | 0.652 | 0.411 | 0.42130639912 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/I | rs944381912 | 0.132 | 0.985 | N | 0.652 | 0.411 | 0.42130639912 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/I | rs944381912 | 0.132 | 0.985 | N | 0.652 | 0.411 | 0.42130639912 | gnomAD-4.0.0 | 3.1047E-06 | None | None | None | None | N | None | 5.36021E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60452E-05 |
M/R | rs778289640 | None | 0.998 | N | 0.838 | 0.649 | 0.718718502515 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/R | rs778289640 | None | 0.998 | N | 0.838 | 0.649 | 0.718718502515 | gnomAD-4.0.0 | 6.56961E-06 | None | None | None | None | N | None | 2.4115E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/T | rs778289640 | -1.437 | 0.994 | N | 0.807 | 0.557 | 0.824319612184 | gnomAD-2.1.1 | 3.64E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.13693E-04 | None | 3.41E-05 | None | 0 | 0 | 1.43225E-04 |
M/T | rs778289640 | -1.437 | 0.994 | N | 0.807 | 0.557 | 0.824319612184 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.85505E-04 | None | 0 | 0 | 0 | 0 | 0 |
M/T | rs778289640 | -1.437 | 0.994 | N | 0.807 | 0.557 | 0.824319612184 | gnomAD-4.0.0 | 4.96719E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.33749E-04 | None | 0 | 0 | 0 | 0 | 3.20873E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.756 | likely_pathogenic | 0.7941 | pathogenic | -1.959 | Destabilizing | 0.989 | D | 0.725 | prob.delet. | None | None | None | None | N |
M/C | 0.8429 | likely_pathogenic | 0.8536 | pathogenic | -2.531 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
M/D | 0.9976 | likely_pathogenic | 0.9979 | pathogenic | -2.19 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
M/E | 0.9798 | likely_pathogenic | 0.9824 | pathogenic | -1.94 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
M/F | 0.8589 | likely_pathogenic | 0.8853 | pathogenic | -0.592 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
M/G | 0.9632 | likely_pathogenic | 0.9718 | pathogenic | -2.429 | Highly Destabilizing | 0.995 | D | 0.79 | deleterious | None | None | None | None | N |
M/H | 0.9822 | likely_pathogenic | 0.9859 | pathogenic | -2.26 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
M/I | 0.8544 | likely_pathogenic | 0.8777 | pathogenic | -0.601 | Destabilizing | 0.985 | D | 0.652 | neutral | N | 0.427934155 | None | None | N |
M/K | 0.9561 | likely_pathogenic | 0.9656 | pathogenic | -1.261 | Destabilizing | 0.994 | D | 0.807 | deleterious | N | 0.514098208 | None | None | N |
M/L | 0.5675 | likely_pathogenic | 0.5924 | pathogenic | -0.601 | Destabilizing | 0.927 | D | 0.431 | neutral | N | 0.479800197 | None | None | N |
M/N | 0.9799 | likely_pathogenic | 0.9823 | pathogenic | -1.751 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
M/P | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -1.038 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
M/Q | 0.8309 | likely_pathogenic | 0.8539 | pathogenic | -1.379 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
M/R | 0.9601 | likely_pathogenic | 0.9728 | pathogenic | -1.557 | Destabilizing | 0.998 | D | 0.838 | deleterious | N | 0.514098208 | None | None | N |
M/S | 0.883 | likely_pathogenic | 0.9069 | pathogenic | -2.227 | Highly Destabilizing | 0.995 | D | 0.79 | deleterious | None | None | None | None | N |
M/T | 0.8908 | likely_pathogenic | 0.9164 | pathogenic | -1.845 | Destabilizing | 0.994 | D | 0.807 | deleterious | N | 0.487093183 | None | None | N |
M/V | 0.3012 | likely_benign | 0.3452 | ambiguous | -1.038 | Destabilizing | 0.985 | D | 0.523 | neutral | N | 0.435070771 | None | None | N |
M/W | 0.9939 | likely_pathogenic | 0.9963 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
M/Y | 0.9863 | likely_pathogenic | 0.9893 | pathogenic | -0.892 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.