Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29651 | 89176;89177;89178 | chr2:178554160;178554159;178554158 | chr2:179418887;179418886;179418885 |
N2AB | 28010 | 84253;84254;84255 | chr2:178554160;178554159;178554158 | chr2:179418887;179418886;179418885 |
N2A | 27083 | 81472;81473;81474 | chr2:178554160;178554159;178554158 | chr2:179418887;179418886;179418885 |
N2B | 20586 | 61981;61982;61983 | chr2:178554160;178554159;178554158 | chr2:179418887;179418886;179418885 |
Novex-1 | 20711 | 62356;62357;62358 | chr2:178554160;178554159;178554158 | chr2:179418887;179418886;179418885 |
Novex-2 | 20778 | 62557;62558;62559 | chr2:178554160;178554159;178554158 | chr2:179418887;179418886;179418885 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 1.0 | N | 0.677 | 0.39 | 0.478299402934 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
T/S | None | None | 0.999 | N | 0.567 | 0.289 | 0.265929055128 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2536 | likely_benign | 0.2764 | benign | -0.929 | Destabilizing | 0.999 | D | 0.576 | neutral | N | 0.481714813 | None | None | N |
T/C | 0.7273 | likely_pathogenic | 0.7355 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
T/D | 0.9048 | likely_pathogenic | 0.883 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/E | 0.8374 | likely_pathogenic | 0.8044 | pathogenic | -1.251 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/F | 0.6177 | likely_pathogenic | 0.6561 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
T/G | 0.7373 | likely_pathogenic | 0.7585 | pathogenic | -1.294 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/H | 0.7348 | likely_pathogenic | 0.7503 | pathogenic | -1.581 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
T/I | 0.2882 | likely_benign | 0.302 | benign | -0.01 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.522850045 | None | None | N |
T/K | 0.865 | likely_pathogenic | 0.8557 | pathogenic | -0.97 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/L | 0.2191 | likely_benign | 0.2339 | benign | -0.01 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
T/M | 0.1169 | likely_benign | 0.1341 | benign | 0.093 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/N | 0.4357 | ambiguous | 0.452 | ambiguous | -1.363 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.483120391 | None | None | N |
T/P | 0.9061 | likely_pathogenic | 0.915 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.516228256 | None | None | N |
T/Q | 0.7292 | likely_pathogenic | 0.7306 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
T/R | 0.8236 | likely_pathogenic | 0.8199 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/S | 0.3726 | ambiguous | 0.4027 | ambiguous | -1.516 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.469153512 | None | None | N |
T/V | 0.2056 | likely_benign | 0.2215 | benign | -0.283 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
T/W | 0.8586 | likely_pathogenic | 0.8596 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
T/Y | 0.6711 | likely_pathogenic | 0.6672 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.