Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29656 | 89191;89192;89193 | chr2:178554145;178554144;178554143 | chr2:179418872;179418871;179418870 |
N2AB | 28015 | 84268;84269;84270 | chr2:178554145;178554144;178554143 | chr2:179418872;179418871;179418870 |
N2A | 27088 | 81487;81488;81489 | chr2:178554145;178554144;178554143 | chr2:179418872;179418871;179418870 |
N2B | 20591 | 61996;61997;61998 | chr2:178554145;178554144;178554143 | chr2:179418872;179418871;179418870 |
Novex-1 | 20716 | 62371;62372;62373 | chr2:178554145;178554144;178554143 | chr2:179418872;179418871;179418870 |
Novex-2 | 20783 | 62572;62573;62574 | chr2:178554145;178554144;178554143 | chr2:179418872;179418871;179418870 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 1.0 | N | 0.691 | 0.358 | 0.599206028305 | gnomAD-4.0.0 | 6.8427E-07 | None | None | None | None | I | None | 2.98846E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6513 | likely_pathogenic | 0.7305 | pathogenic | -0.131 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
R/C | 0.2675 | likely_benign | 0.35 | ambiguous | -0.446 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
R/D | 0.8741 | likely_pathogenic | 0.9123 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
R/E | 0.6 | likely_pathogenic | 0.6797 | pathogenic | -0.264 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | I |
R/F | 0.7884 | likely_pathogenic | 0.8572 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
R/G | 0.5565 | ambiguous | 0.6721 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.509995391 | None | None | I |
R/H | 0.1641 | likely_benign | 0.2054 | benign | -1.059 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
R/I | 0.6052 | likely_pathogenic | 0.6801 | pathogenic | 0.474 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
R/K | 0.1632 | likely_benign | 0.1829 | benign | -0.188 | Destabilizing | 0.997 | D | 0.57 | neutral | N | 0.460644006 | None | None | I |
R/L | 0.4763 | ambiguous | 0.5657 | pathogenic | 0.474 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
R/M | 0.5883 | likely_pathogenic | 0.6747 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.518404231 | None | None | I |
R/N | 0.8235 | likely_pathogenic | 0.876 | pathogenic | -0.249 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
R/P | 0.5048 | ambiguous | 0.5777 | pathogenic | 0.292 | Stabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
R/Q | 0.1783 | likely_benign | 0.2185 | benign | -0.182 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
R/S | 0.7468 | likely_pathogenic | 0.8236 | pathogenic | -0.513 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.470957001 | None | None | I |
R/T | 0.6265 | likely_pathogenic | 0.7133 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.517190723 | None | None | I |
R/V | 0.6514 | likely_pathogenic | 0.7167 | pathogenic | 0.292 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
R/W | 0.3329 | likely_benign | 0.4327 | ambiguous | -0.294 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.502982165 | None | None | I |
R/Y | 0.5872 | likely_pathogenic | 0.6797 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.