Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2966 | 9121;9122;9123 | chr2:178769685;178769684;178769683 | chr2:179634412;179634411;179634410 |
N2AB | 2966 | 9121;9122;9123 | chr2:178769685;178769684;178769683 | chr2:179634412;179634411;179634410 |
N2A | 2966 | 9121;9122;9123 | chr2:178769685;178769684;178769683 | chr2:179634412;179634411;179634410 |
N2B | 2920 | 8983;8984;8985 | chr2:178769685;178769684;178769683 | chr2:179634412;179634411;179634410 |
Novex-1 | 2920 | 8983;8984;8985 | chr2:178769685;178769684;178769683 | chr2:179634412;179634411;179634410 |
Novex-2 | 2920 | 8983;8984;8985 | chr2:178769685;178769684;178769683 | chr2:179634412;179634411;179634410 |
Novex-3 | 2966 | 9121;9122;9123 | chr2:178769685;178769684;178769683 | chr2:179634412;179634411;179634410 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | D | 0.527 | 0.552 | 0.763078722514 | gnomAD-4.0.0 | 1.20062E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66435E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8878 | likely_pathogenic | 0.9174 | pathogenic | -1.424 | Destabilizing | 0.999 | D | 0.619 | neutral | D | 0.770099756 | None | None | N |
V/C | 0.9794 | likely_pathogenic | 0.9875 | pathogenic | -2.059 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/D | 0.9982 | likely_pathogenic | 0.9987 | pathogenic | -3.203 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.768369075 | None | None | N |
V/E | 0.9931 | likely_pathogenic | 0.9944 | pathogenic | -3.137 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/F | 0.9738 | likely_pathogenic | 0.9791 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.768555823 | None | None | N |
V/G | 0.9615 | likely_pathogenic | 0.9713 | pathogenic | -1.732 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.768369075 | None | None | N |
V/H | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
V/I | 0.165 | likely_benign | 0.1747 | benign | -0.636 | Destabilizing | 0.997 | D | 0.527 | neutral | D | 0.598303146 | None | None | N |
V/K | 0.9934 | likely_pathogenic | 0.9951 | pathogenic | -1.413 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/L | 0.8925 | likely_pathogenic | 0.9212 | pathogenic | -0.636 | Destabilizing | 0.997 | D | 0.592 | neutral | D | 0.627265702 | None | None | N |
V/M | 0.8603 | likely_pathogenic | 0.8807 | pathogenic | -1.04 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/N | 0.99 | likely_pathogenic | 0.9927 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/P | 0.9944 | likely_pathogenic | 0.9953 | pathogenic | -0.872 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
V/Q | 0.9933 | likely_pathogenic | 0.9947 | pathogenic | -1.911 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/R | 0.9904 | likely_pathogenic | 0.9922 | pathogenic | -0.991 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/S | 0.962 | likely_pathogenic | 0.973 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/T | 0.8781 | likely_pathogenic | 0.9185 | pathogenic | -1.89 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.359 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/Y | 0.9978 | likely_pathogenic | 0.9984 | pathogenic | -0.998 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.