Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29665 | 89218;89219;89220 | chr2:178554118;178554117;178554116 | chr2:179418845;179418844;179418843 |
N2AB | 28024 | 84295;84296;84297 | chr2:178554118;178554117;178554116 | chr2:179418845;179418844;179418843 |
N2A | 27097 | 81514;81515;81516 | chr2:178554118;178554117;178554116 | chr2:179418845;179418844;179418843 |
N2B | 20600 | 62023;62024;62025 | chr2:178554118;178554117;178554116 | chr2:179418845;179418844;179418843 |
Novex-1 | 20725 | 62398;62399;62400 | chr2:178554118;178554117;178554116 | chr2:179418845;179418844;179418843 |
Novex-2 | 20792 | 62599;62600;62601 | chr2:178554118;178554117;178554116 | chr2:179418845;179418844;179418843 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.043 | N | 0.415 | 0.166 | 0.235664433957 | gnomAD-4.0.0 | 6.84187E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99446E-07 | 0 | 0 |
I/R | None | None | 0.781 | D | 0.837 | 0.545 | 0.841281731114 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
I/V | rs1700376721 | None | 0.001 | N | 0.252 | 0.082 | 0.230578612272 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06697E-04 | 0 |
I/V | rs1700376721 | None | 0.001 | N | 0.252 | 0.082 | 0.230578612272 | gnomAD-4.0.0 | 3.09832E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54275E-06 | 2.19553E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8929 | likely_pathogenic | 0.9341 | pathogenic | -2.27 | Highly Destabilizing | 0.25 | N | 0.657 | neutral | None | None | None | None | I |
I/C | 0.917 | likely_pathogenic | 0.9434 | pathogenic | -1.631 | Destabilizing | 0.947 | D | 0.73 | prob.delet. | None | None | None | None | I |
I/D | 0.9907 | likely_pathogenic | 0.9948 | pathogenic | -1.97 | Destabilizing | 0.826 | D | 0.839 | deleterious | None | None | None | None | I |
I/E | 0.9825 | likely_pathogenic | 0.9896 | pathogenic | -1.889 | Destabilizing | 0.826 | D | 0.832 | deleterious | None | None | None | None | I |
I/F | 0.7705 | likely_pathogenic | 0.8485 | pathogenic | -1.579 | Destabilizing | 0.7 | D | 0.733 | prob.delet. | None | None | None | None | I |
I/G | 0.9781 | likely_pathogenic | 0.9896 | pathogenic | -2.694 | Highly Destabilizing | 0.826 | D | 0.835 | deleterious | None | None | None | None | I |
I/H | 0.9828 | likely_pathogenic | 0.9897 | pathogenic | -1.907 | Destabilizing | 0.982 | D | 0.805 | deleterious | None | None | None | None | I |
I/K | 0.9733 | likely_pathogenic | 0.9816 | pathogenic | -1.596 | Destabilizing | 0.781 | D | 0.831 | deleterious | D | 0.556394148 | None | None | I |
I/L | 0.294 | likely_benign | 0.3555 | ambiguous | -1.12 | Destabilizing | 0.043 | N | 0.415 | neutral | N | 0.49522762 | None | None | I |
I/M | 0.4659 | ambiguous | 0.566 | pathogenic | -0.941 | Destabilizing | 0.638 | D | 0.699 | prob.neutral | D | 0.544023884 | None | None | I |
I/N | 0.911 | likely_pathogenic | 0.938 | pathogenic | -1.564 | Destabilizing | 0.935 | D | 0.838 | deleterious | None | None | None | None | I |
I/P | 0.9098 | likely_pathogenic | 0.9261 | pathogenic | -1.476 | Destabilizing | 0.826 | D | 0.839 | deleterious | None | None | None | None | I |
I/Q | 0.9774 | likely_pathogenic | 0.9867 | pathogenic | -1.673 | Destabilizing | 0.935 | D | 0.831 | deleterious | None | None | None | None | I |
I/R | 0.9574 | likely_pathogenic | 0.9713 | pathogenic | -1.035 | Destabilizing | 0.781 | D | 0.837 | deleterious | D | 0.556394148 | None | None | I |
I/S | 0.9117 | likely_pathogenic | 0.9432 | pathogenic | -2.282 | Highly Destabilizing | 0.7 | D | 0.81 | deleterious | None | None | None | None | I |
I/T | 0.8009 | likely_pathogenic | 0.8675 | pathogenic | -2.067 | Highly Destabilizing | 0.201 | N | 0.765 | deleterious | D | 0.523539772 | None | None | I |
I/V | 0.0753 | likely_benign | 0.0927 | benign | -1.476 | Destabilizing | 0.001 | N | 0.252 | neutral | N | 0.488854902 | None | None | I |
I/W | 0.9928 | likely_pathogenic | 0.9964 | pathogenic | -1.722 | Destabilizing | 0.982 | D | 0.759 | deleterious | None | None | None | None | I |
I/Y | 0.9564 | likely_pathogenic | 0.9707 | pathogenic | -1.498 | Destabilizing | 0.826 | D | 0.771 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.