Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29669 | 89230;89231;89232 | chr2:178554106;178554105;178554104 | chr2:179418833;179418832;179418831 |
N2AB | 28028 | 84307;84308;84309 | chr2:178554106;178554105;178554104 | chr2:179418833;179418832;179418831 |
N2A | 27101 | 81526;81527;81528 | chr2:178554106;178554105;178554104 | chr2:179418833;179418832;179418831 |
N2B | 20604 | 62035;62036;62037 | chr2:178554106;178554105;178554104 | chr2:179418833;179418832;179418831 |
Novex-1 | 20729 | 62410;62411;62412 | chr2:178554106;178554105;178554104 | chr2:179418833;179418832;179418831 |
Novex-2 | 20796 | 62611;62612;62613 | chr2:178554106;178554105;178554104 | chr2:179418833;179418832;179418831 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.055 | N | 0.605 | 0.216 | 0.317378411342 | gnomAD-4.0.0 | 1.59111E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85794E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5504 | ambiguous | 0.5722 | pathogenic | -2.951 | Highly Destabilizing | 0.031 | N | 0.561 | neutral | None | None | None | None | N |
F/C | 0.2126 | likely_benign | 0.2165 | benign | -1.542 | Destabilizing | 0.56 | D | 0.637 | neutral | N | 0.44902429 | None | None | N |
F/D | 0.7632 | likely_pathogenic | 0.7838 | pathogenic | -2.38 | Highly Destabilizing | 0.136 | N | 0.661 | neutral | None | None | None | None | N |
F/E | 0.7893 | likely_pathogenic | 0.798 | pathogenic | -2.25 | Highly Destabilizing | 0.136 | N | 0.611 | neutral | None | None | None | None | N |
F/G | 0.8116 | likely_pathogenic | 0.8388 | pathogenic | -3.328 | Highly Destabilizing | 0.136 | N | 0.618 | neutral | None | None | None | None | N |
F/H | 0.3189 | likely_benign | 0.3213 | benign | -1.524 | Destabilizing | 0.214 | N | 0.643 | neutral | None | None | None | None | N |
F/I | 0.105 | likely_benign | 0.1099 | benign | -1.753 | Destabilizing | None | N | 0.289 | neutral | N | 0.329812962 | None | None | N |
F/K | 0.7805 | likely_pathogenic | 0.7948 | pathogenic | -1.774 | Destabilizing | 0.072 | N | 0.608 | neutral | None | None | None | None | N |
F/L | 0.6029 | likely_pathogenic | 0.634 | pathogenic | -1.753 | Destabilizing | None | N | 0.217 | neutral | N | 0.369792716 | None | None | N |
F/M | 0.3554 | ambiguous | 0.3757 | ambiguous | -1.308 | Destabilizing | 0.003 | N | 0.391 | neutral | None | None | None | None | N |
F/N | 0.4502 | ambiguous | 0.4713 | ambiguous | -1.902 | Destabilizing | 0.356 | N | 0.661 | neutral | None | None | None | None | N |
F/P | 0.9944 | likely_pathogenic | 0.9963 | pathogenic | -2.157 | Highly Destabilizing | 0.628 | D | 0.663 | neutral | None | None | None | None | N |
F/Q | 0.6005 | likely_pathogenic | 0.6097 | pathogenic | -2.019 | Highly Destabilizing | 0.356 | N | 0.662 | neutral | None | None | None | None | N |
F/R | 0.6714 | likely_pathogenic | 0.6894 | pathogenic | -1.019 | Destabilizing | 0.214 | N | 0.655 | neutral | None | None | None | None | N |
F/S | 0.3594 | ambiguous | 0.3863 | ambiguous | -2.663 | Highly Destabilizing | 0.055 | N | 0.605 | neutral | N | 0.427838155 | None | None | N |
F/T | 0.3782 | ambiguous | 0.3866 | ambiguous | -2.443 | Highly Destabilizing | 0.072 | N | 0.603 | neutral | None | None | None | None | N |
F/V | 0.1346 | likely_benign | 0.1389 | benign | -2.157 | Highly Destabilizing | 0.002 | N | 0.489 | neutral | N | 0.34266483 | None | None | N |
F/W | 0.4141 | ambiguous | 0.4467 | ambiguous | -0.62 | Destabilizing | 0.356 | N | 0.627 | neutral | None | None | None | None | N |
F/Y | 0.083 | likely_benign | 0.085 | benign | -0.969 | Destabilizing | None | N | 0.194 | neutral | N | 0.376046684 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.