Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29678 | 89257;89258;89259 | chr2:178554079;178554078;178554077 | chr2:179418806;179418805;179418804 |
N2AB | 28037 | 84334;84335;84336 | chr2:178554079;178554078;178554077 | chr2:179418806;179418805;179418804 |
N2A | 27110 | 81553;81554;81555 | chr2:178554079;178554078;178554077 | chr2:179418806;179418805;179418804 |
N2B | 20613 | 62062;62063;62064 | chr2:178554079;178554078;178554077 | chr2:179418806;179418805;179418804 |
Novex-1 | 20738 | 62437;62438;62439 | chr2:178554079;178554078;178554077 | chr2:179418806;179418805;179418804 |
Novex-2 | 20805 | 62638;62639;62640 | chr2:178554079;178554078;178554077 | chr2:179418806;179418805;179418804 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.735 | 0.572 | 0.706817979235 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85804E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.162 | likely_benign | 0.178 | benign | -0.511 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | N |
L/C | 0.5096 | ambiguous | 0.5371 | ambiguous | -0.968 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/D | 0.7184 | likely_pathogenic | 0.7538 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/E | 0.4742 | ambiguous | 0.5045 | ambiguous | -0.124 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/F | 0.1599 | likely_benign | 0.1815 | benign | -0.675 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/G | 0.4161 | ambiguous | 0.4584 | ambiguous | -0.577 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/H | 0.2623 | likely_benign | 0.2886 | benign | -0.052 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
L/I | 0.0978 | likely_benign | 0.0987 | benign | -0.444 | Destabilizing | 0.999 | D | 0.556 | neutral | N | 0.484849018 | None | None | N |
L/K | 0.3652 | ambiguous | 0.3695 | ambiguous | -0.388 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/M | 0.1141 | likely_benign | 0.1144 | benign | -0.707 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
L/N | 0.343 | ambiguous | 0.3637 | ambiguous | -0.304 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/P | 0.1699 | likely_benign | 0.1927 | benign | -0.443 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.491081557 | None | None | N |
L/Q | 0.1762 | likely_benign | 0.1793 | benign | -0.417 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.458873138 | None | None | N |
L/R | 0.2497 | likely_benign | 0.2661 | benign | -0.038 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.476864253 | None | None | N |
L/S | 0.2063 | likely_benign | 0.2326 | benign | -0.711 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/T | 0.1438 | likely_benign | 0.1534 | benign | -0.698 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/V | 0.0916 | likely_benign | 0.0933 | benign | -0.443 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.464396388 | None | None | N |
L/W | 0.2889 | likely_benign | 0.3331 | benign | -0.684 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
L/Y | 0.3847 | ambiguous | 0.4218 | ambiguous | -0.487 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.