Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29682 | 89269;89270;89271 | chr2:178554067;178554066;178554065 | chr2:179418794;179418793;179418792 |
N2AB | 28041 | 84346;84347;84348 | chr2:178554067;178554066;178554065 | chr2:179418794;179418793;179418792 |
N2A | 27114 | 81565;81566;81567 | chr2:178554067;178554066;178554065 | chr2:179418794;179418793;179418792 |
N2B | 20617 | 62074;62075;62076 | chr2:178554067;178554066;178554065 | chr2:179418794;179418793;179418792 |
Novex-1 | 20742 | 62449;62450;62451 | chr2:178554067;178554066;178554065 | chr2:179418794;179418793;179418792 |
Novex-2 | 20809 | 62650;62651;62652 | chr2:178554067;178554066;178554065 | chr2:179418794;179418793;179418792 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs370563246 | -0.279 | 1.0 | N | 0.734 | 0.404 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.56E-05 | 0 |
K/Q | rs370563246 | -0.279 | 1.0 | N | 0.734 | 0.404 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
K/Q | rs370563246 | -0.279 | 1.0 | N | 0.734 | 0.404 | None | gnomAD-4.0.0 | 1.85903E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54277E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6804 | likely_pathogenic | 0.7837 | pathogenic | -0.498 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
K/C | 0.815 | likely_pathogenic | 0.8617 | pathogenic | -0.632 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
K/D | 0.925 | likely_pathogenic | 0.958 | pathogenic | 0.037 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
K/E | 0.6044 | likely_pathogenic | 0.7421 | pathogenic | 0.179 | Stabilizing | 0.999 | D | 0.655 | neutral | N | 0.490196122 | None | None | I |
K/F | 0.9311 | likely_pathogenic | 0.9571 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
K/G | 0.8117 | likely_pathogenic | 0.8768 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
K/H | 0.4598 | ambiguous | 0.5336 | ambiguous | -1.039 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
K/I | 0.6992 | likely_pathogenic | 0.788 | pathogenic | 0.491 | Stabilizing | 1.0 | D | 0.75 | deleterious | D | 0.523444691 | None | None | I |
K/L | 0.6017 | likely_pathogenic | 0.6931 | pathogenic | 0.491 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
K/M | 0.5471 | ambiguous | 0.6564 | pathogenic | 0.118 | Stabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
K/N | 0.8395 | likely_pathogenic | 0.9022 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.766 | deleterious | N | 0.476813288 | None | None | I |
K/P | 0.6197 | likely_pathogenic | 0.7087 | pathogenic | 0.192 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
K/Q | 0.2594 | likely_benign | 0.3411 | ambiguous | -0.479 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | N | 0.511515544 | None | None | I |
K/R | 0.0699 | likely_benign | 0.0737 | benign | -0.53 | Destabilizing | 0.999 | D | 0.588 | neutral | N | 0.426667506 | None | None | I |
K/S | 0.7903 | likely_pathogenic | 0.869 | pathogenic | -1.15 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
K/T | 0.4975 | ambiguous | 0.6094 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.486638529 | None | None | I |
K/V | 0.6263 | likely_pathogenic | 0.7195 | pathogenic | 0.192 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
K/W | 0.8759 | likely_pathogenic | 0.9176 | pathogenic | 0.049 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
K/Y | 0.8437 | likely_pathogenic | 0.8933 | pathogenic | 0.331 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.