Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29683 | 89272;89273;89274 | chr2:178554064;178554063;178554062 | chr2:179418791;179418790;179418789 |
N2AB | 28042 | 84349;84350;84351 | chr2:178554064;178554063;178554062 | chr2:179418791;179418790;179418789 |
N2A | 27115 | 81568;81569;81570 | chr2:178554064;178554063;178554062 | chr2:179418791;179418790;179418789 |
N2B | 20618 | 62077;62078;62079 | chr2:178554064;178554063;178554062 | chr2:179418791;179418790;179418789 |
Novex-1 | 20743 | 62452;62453;62454 | chr2:178554064;178554063;178554062 | chr2:179418791;179418790;179418789 |
Novex-2 | 20810 | 62653;62654;62655 | chr2:178554064;178554063;178554062 | chr2:179418791;179418790;179418789 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs749433506 | -0.376 | 0.997 | N | 0.478 | 0.24 | 0.566263476786 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 1.66926E-04 | None | 0 | None | 0 | 0 | 0 |
V/I | rs749433506 | -0.376 | 0.997 | N | 0.478 | 0.24 | 0.566263476786 | gnomAD-4.0.0 | 4.7735E-06 | None | None | None | None | I | None | 0 | 2.28634E-05 | None | 0 | 5.5457E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3658 | ambiguous | 0.4456 | ambiguous | -1.204 | Destabilizing | 0.999 | D | 0.547 | neutral | N | 0.50120255 | None | None | I |
V/C | 0.7631 | likely_pathogenic | 0.7916 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
V/D | 0.9131 | likely_pathogenic | 0.9533 | pathogenic | -0.974 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
V/E | 0.8622 | likely_pathogenic | 0.9175 | pathogenic | -0.936 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.488896246 | None | None | I |
V/F | 0.4386 | ambiguous | 0.5731 | pathogenic | -0.755 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
V/G | 0.5329 | ambiguous | 0.6265 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.507096769 | None | None | I |
V/H | 0.9277 | likely_pathogenic | 0.9567 | pathogenic | -0.972 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
V/I | 0.0998 | likely_benign | 0.1096 | benign | -0.384 | Destabilizing | 0.997 | D | 0.478 | neutral | N | 0.517596154 | None | None | I |
V/K | 0.9361 | likely_pathogenic | 0.9628 | pathogenic | -1.177 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
V/L | 0.3931 | ambiguous | 0.5084 | ambiguous | -0.384 | Destabilizing | 0.997 | D | 0.533 | neutral | N | 0.500087829 | None | None | I |
V/M | 0.3577 | ambiguous | 0.451 | ambiguous | -0.495 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
V/N | 0.7563 | likely_pathogenic | 0.8384 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
V/P | 0.8749 | likely_pathogenic | 0.9115 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | I |
V/Q | 0.8664 | likely_pathogenic | 0.9111 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
V/R | 0.9167 | likely_pathogenic | 0.9506 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
V/S | 0.5929 | likely_pathogenic | 0.697 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
V/T | 0.5054 | ambiguous | 0.5664 | pathogenic | -1.493 | Destabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | I |
V/W | 0.9716 | likely_pathogenic | 0.986 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
V/Y | 0.8534 | likely_pathogenic | 0.9132 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.