Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29685 | 89278;89279;89280 | chr2:178554058;178554057;178554056 | chr2:179418785;179418784;179418783 |
N2AB | 28044 | 84355;84356;84357 | chr2:178554058;178554057;178554056 | chr2:179418785;179418784;179418783 |
N2A | 27117 | 81574;81575;81576 | chr2:178554058;178554057;178554056 | chr2:179418785;179418784;179418783 |
N2B | 20620 | 62083;62084;62085 | chr2:178554058;178554057;178554056 | chr2:179418785;179418784;179418783 |
Novex-1 | 20745 | 62458;62459;62460 | chr2:178554058;178554057;178554056 | chr2:179418785;179418784;179418783 |
Novex-2 | 20812 | 62659;62660;62661 | chr2:178554058;178554057;178554056 | chr2:179418785;179418784;179418783 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs773157007 | -0.382 | 0.999 | N | 0.626 | 0.256 | 0.425970041486 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.15882E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs773157007 | -0.382 | 0.999 | N | 0.626 | 0.256 | 0.425970041486 | gnomAD-4.0.0 | 6.36452E-06 | None | None | None | None | N | None | 0 | 9.14537E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6742 | likely_pathogenic | 0.8337 | pathogenic | 0.068 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/C | 0.8809 | likely_pathogenic | 0.94 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
K/D | 0.7845 | likely_pathogenic | 0.8949 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/E | 0.4879 | ambiguous | 0.7351 | pathogenic | -0.197 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.495546014 | None | None | N |
K/F | 0.9566 | likely_pathogenic | 0.9843 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
K/G | 0.6274 | likely_pathogenic | 0.7833 | pathogenic | -0.08 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
K/H | 0.4786 | ambiguous | 0.6105 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
K/I | 0.8278 | likely_pathogenic | 0.9281 | pathogenic | 0.377 | Stabilizing | 1.0 | D | 0.831 | deleterious | N | 0.520596387 | None | None | N |
K/L | 0.747 | likely_pathogenic | 0.8731 | pathogenic | 0.377 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
K/M | 0.661 | likely_pathogenic | 0.8301 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
K/N | 0.7419 | likely_pathogenic | 0.8638 | pathogenic | 0.005 | Stabilizing | 1.0 | D | 0.782 | deleterious | N | 0.477454717 | None | None | N |
K/P | 0.6265 | likely_pathogenic | 0.7709 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
K/Q | 0.2613 | likely_benign | 0.4081 | ambiguous | -0.103 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.466658297 | None | None | N |
K/R | 0.0847 | likely_benign | 0.0951 | benign | -0.079 | Destabilizing | 0.999 | D | 0.626 | neutral | N | 0.468975488 | None | None | N |
K/S | 0.702 | likely_pathogenic | 0.8357 | pathogenic | -0.353 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/T | 0.4937 | ambiguous | 0.6826 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.488443896 | None | None | N |
K/V | 0.7694 | likely_pathogenic | 0.8917 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/W | 0.8738 | likely_pathogenic | 0.9457 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
K/Y | 0.8599 | likely_pathogenic | 0.9354 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.