Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29686 | 89281;89282;89283 | chr2:178554055;178554054;178554053 | chr2:179418782;179418781;179418780 |
N2AB | 28045 | 84358;84359;84360 | chr2:178554055;178554054;178554053 | chr2:179418782;179418781;179418780 |
N2A | 27118 | 81577;81578;81579 | chr2:178554055;178554054;178554053 | chr2:179418782;179418781;179418780 |
N2B | 20621 | 62086;62087;62088 | chr2:178554055;178554054;178554053 | chr2:179418782;179418781;179418780 |
Novex-1 | 20746 | 62461;62462;62463 | chr2:178554055;178554054;178554053 | chr2:179418782;179418781;179418780 |
Novex-2 | 20813 | 62662;62663;62664 | chr2:178554055;178554054;178554053 | chr2:179418782;179418781;179418780 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1164496806 | -0.22 | 0.035 | N | 0.141 | 0.071 | 0.202086224978 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/K | None | None | 0.92 | N | 0.435 | 0.256 | 0.271763555656 | gnomAD-4.0.0 | 6.84199E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51915E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.959 | N | 0.435 | 0.243 | 0.267755039894 | gnomAD-4.0.0 | 6.84199E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99444E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2619 | likely_benign | 0.2929 | benign | -0.029 | Destabilizing | 0.826 | D | 0.459 | neutral | N | 0.438305865 | None | None | I |
E/C | 0.8983 | likely_pathogenic | 0.9139 | pathogenic | -0.348 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | I |
E/D | 0.0758 | likely_benign | 0.0805 | benign | -0.325 | Destabilizing | 0.035 | N | 0.141 | neutral | N | 0.4190481 | None | None | I |
E/F | 0.8698 | likely_pathogenic | 0.8965 | pathogenic | 0.04 | Stabilizing | 0.997 | D | 0.437 | neutral | None | None | None | None | I |
E/G | 0.1869 | likely_benign | 0.2061 | benign | -0.158 | Destabilizing | 0.015 | N | 0.206 | neutral | N | 0.456643696 | None | None | I |
E/H | 0.6524 | likely_pathogenic | 0.7009 | pathogenic | 0.713 | Stabilizing | 0.997 | D | 0.431 | neutral | None | None | None | None | I |
E/I | 0.603 | likely_pathogenic | 0.6454 | pathogenic | 0.258 | Stabilizing | 0.997 | D | 0.439 | neutral | None | None | None | None | I |
E/K | 0.3741 | ambiguous | 0.404 | ambiguous | 0.369 | Stabilizing | 0.92 | D | 0.435 | neutral | N | 0.433401477 | None | None | I |
E/L | 0.6625 | likely_pathogenic | 0.7017 | pathogenic | 0.258 | Stabilizing | 0.991 | D | 0.416 | neutral | None | None | None | None | I |
E/M | 0.6661 | likely_pathogenic | 0.7094 | pathogenic | -0.059 | Destabilizing | 0.999 | D | 0.442 | neutral | None | None | None | None | I |
E/N | 0.2512 | likely_benign | 0.2656 | benign | -0.01 | Destabilizing | 0.939 | D | 0.442 | neutral | None | None | None | None | I |
E/P | 0.8157 | likely_pathogenic | 0.861 | pathogenic | 0.18 | Stabilizing | 0.997 | D | 0.443 | neutral | None | None | None | None | I |
E/Q | 0.2769 | likely_benign | 0.2931 | benign | 0.028 | Stabilizing | 0.959 | D | 0.435 | neutral | N | 0.46984228 | None | None | I |
E/R | 0.5497 | ambiguous | 0.6002 | pathogenic | 0.674 | Stabilizing | 0.991 | D | 0.439 | neutral | None | None | None | None | I |
E/S | 0.2709 | likely_benign | 0.2897 | benign | -0.127 | Destabilizing | 0.939 | D | 0.429 | neutral | None | None | None | None | I |
E/T | 0.3011 | likely_benign | 0.3193 | benign | -0.007 | Destabilizing | 0.969 | D | 0.449 | neutral | None | None | None | None | I |
E/V | 0.3619 | ambiguous | 0.4015 | ambiguous | 0.18 | Stabilizing | 0.996 | D | 0.427 | neutral | N | 0.450288153 | None | None | I |
E/W | 0.9497 | likely_pathogenic | 0.9637 | pathogenic | 0.114 | Stabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | I |
E/Y | 0.7124 | likely_pathogenic | 0.7631 | pathogenic | 0.267 | Stabilizing | 0.997 | D | 0.445 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.