Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29688 | 89287;89288;89289 | chr2:178554049;178554048;178554047 | chr2:179418776;179418775;179418774 |
N2AB | 28047 | 84364;84365;84366 | chr2:178554049;178554048;178554047 | chr2:179418776;179418775;179418774 |
N2A | 27120 | 81583;81584;81585 | chr2:178554049;178554048;178554047 | chr2:179418776;179418775;179418774 |
N2B | 20623 | 62092;62093;62094 | chr2:178554049;178554048;178554047 | chr2:179418776;179418775;179418774 |
Novex-1 | 20748 | 62467;62468;62469 | chr2:178554049;178554048;178554047 | chr2:179418776;179418775;179418774 |
Novex-2 | 20815 | 62668;62669;62670 | chr2:178554049;178554048;178554047 | chr2:179418776;179418775;179418774 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs748577989 | -0.738 | 0.993 | N | 0.422 | 0.245 | 0.54626238531 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
I/L | rs748577989 | -0.738 | 0.993 | N | 0.422 | 0.245 | 0.54626238531 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/L | rs748577989 | -0.738 | 0.993 | N | 0.422 | 0.245 | 0.54626238531 | gnomAD-4.0.0 | 5.124E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.57112E-06 | 0 | 0 |
I/N | rs1559224502 | None | 1.0 | N | 0.737 | 0.474 | 0.803802688793 | gnomAD-4.0.0 | 6.15786E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49723E-06 | 3.47818E-05 | 1.65651E-05 |
I/T | rs1559224502 | None | 1.0 | N | 0.642 | 0.451 | 0.669533849121 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 5.79E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1559224502 | None | 1.0 | N | 0.642 | 0.451 | 0.669533849121 | gnomAD-4.0.0 | 1.36841E-06 | None | None | None | None | N | None | 0 | 4.47207E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs748577989 | None | 0.993 | N | 0.405 | 0.173 | 0.522290170867 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs748577989 | None | 0.993 | N | 0.405 | 0.173 | 0.522290170867 | gnomAD-4.0.0 | 2.562E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78556E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7136 | likely_pathogenic | 0.7784 | pathogenic | -2.225 | Highly Destabilizing | 0.999 | D | 0.502 | neutral | None | None | None | None | N |
I/C | 0.836 | likely_pathogenic | 0.8687 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/D | 0.9876 | likely_pathogenic | 0.993 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/E | 0.9684 | likely_pathogenic | 0.9783 | pathogenic | -1.858 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/F | 0.5511 | ambiguous | 0.6192 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.675 | neutral | N | 0.47834377 | None | None | N |
I/G | 0.9351 | likely_pathogenic | 0.9582 | pathogenic | -2.76 | Highly Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/H | 0.9454 | likely_pathogenic | 0.9643 | pathogenic | -2.121 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
I/K | 0.9371 | likely_pathogenic | 0.9558 | pathogenic | -1.545 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
I/L | 0.1917 | likely_benign | 0.2083 | benign | -0.697 | Destabilizing | 0.993 | D | 0.422 | neutral | N | 0.513456984 | None | None | N |
I/M | 0.2426 | likely_benign | 0.2677 | benign | -0.616 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.48788965 | None | None | N |
I/N | 0.8245 | likely_pathogenic | 0.8706 | pathogenic | -1.782 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.466009506 | None | None | N |
I/P | 0.9645 | likely_pathogenic | 0.9799 | pathogenic | -1.185 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/Q | 0.9179 | likely_pathogenic | 0.9376 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
I/R | 0.9065 | likely_pathogenic | 0.9347 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/S | 0.7578 | likely_pathogenic | 0.8189 | pathogenic | -2.531 | Highly Destabilizing | 1.0 | D | 0.632 | neutral | N | 0.506664298 | None | None | N |
I/T | 0.6771 | likely_pathogenic | 0.7261 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.642 | neutral | N | 0.511456829 | None | None | N |
I/V | 0.0832 | likely_benign | 0.0861 | benign | -1.185 | Destabilizing | 0.993 | D | 0.405 | neutral | N | 0.399576905 | None | None | N |
I/W | 0.9728 | likely_pathogenic | 0.9825 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/Y | 0.9279 | likely_pathogenic | 0.9494 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.